Pandoraea sputorum: NA29_05510
Help
Entry
NA29_05510 CDS
T03554
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspu03000
]
NA29_05510
Transcription factors [BR:
pspu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NA29_05510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_28
DUF5550
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AJC15647
UniProt:
A0A239S6Q1
LinkDB
All DBs
Position
278870..280210
Genome browser
AA seq
446 aa
AA seq
DB search
MAIDTAISLTNAPPAHRLACHERGTWSRAPQSNEATLLVRKLRGLRAMVAVLECDSVARA
ARMLHLSQSAVARSISDIEAELGFPLFHRSGRGLIPNAAGQRLGVRATRALAELANGYRE
AFAATASQADGGARAASRFAAVVAPQQLTSFIAVAELGSGPLAATRLQCSQPTIQRNLDQ
LEDLIGIKLFRRTPRGTRLTDEAVALLGPVKRALAELAIAEDELAPFGGRQQGTVIVAAL
PLSSGFLLPKAIDSLLHKSPYLTVTVVDGTYEALVRQLRQADVDMIVGALRANDVPPDIR
QEALFEDHLSVVARADHPCLTSGKTPTLAELAGYGWVSPLPCTPAREVFERVFHAEGLAL
PHTQVHASSSPVVRGLLSSSDRLALLSPVQITSELRTGELAVVPVTLQHARRSIGVATRR
DGLLSPAAEQLLDELRALAPTMQHPS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgataccgccatcagtctgaccaacgcgccgccggcgcaccggctcgcgtgt
cacgaacgcggcacgtggagccgtgcgccgcaaagcaacgaagccacgctgctggttcgc
aagctgcgcggattgcgcgcgatggtcgcggtgctggagtgcgattccgtcgcgcgcgca
gcccgcatgctgcatctctcgcaatcggccgttgcccgttcgatctcggacatcgaggcg
gaattgggctttccgctgtttcaccgcagcgggcgcgggctgattccgaacgcggcgggg
caacggctcggtgtgcgcgcgacgcgtgcgctcgcggagctggcgaacggctatcgtgaa
gcgttcgcggcgacggcatcgcaagcagacggcggcgcgcgtgccgcaagccggttcgcc
gccgtggtcgcgccgcagcaactcacgagtttcattgccgttgcggaactgggcagcgga
ccgttggcggcgacgcgtctgcaatgctcgcagccgaccatccaacgcaatctggatcag
ctcgaagacctcatcggcatcaagctgttccggcgcacgccgcgcggtacgcgtctgacc
gacgaggccgtcgcgctactcggtcccgtcaaacgcgcgctcgcggaactggcgattgcc
gaagacgaactcgcaccgttcggcggacgccagcaaggcacggtcatcgtggcggccttg
ccgctatcgagcggctttctgctgcccaaggcgatcgacagtctgctgcacaagtcgccg
tatctcacggtgacggtcgtcgacggtacctacgaagcgctggtgcgtcagttgcgccag
gcggacgtcgacatgatcgtcggtgcgctgcgtgcgaacgacgtgccgccggatatccgt
caggaagcgcttttcgaggatcacctgtcggtcgtcgcgcgcgcggaccatccgtgcctg
acatccggcaaaacgcctacgctcgccgaactcgccgggtacggctgggtcagcccgctg
ccgtgcacaccggcgcgcgaggtgttcgagcgtgtgttccatgcagaaggtcttgcgctg
ccgcacacgcaggtgcacgcgagcagctcgccggtggtgcgcgggttgctttcgtcgagc
gaccgtctcgcgttgctctcgccggtgcagatcacgtcggagttgcgcacgggggagctg
gccgtggtgccggtgacgttgcagcacgcgcgccgttccatcggcgtggccacgcgccgc
gacggtttgctttcaccggccgcagagcagttgctcgacgaattgcgcgcgcttgcgccg
acgatgcagcatccgtcgtaa
DBGET
integrated database retrieval system
