KEGG   Pandoraea sputorum: NA29_06650
Entry
NA29_06650        CDS       T03554                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pspu  Pandoraea sputorum
Pathway
pspu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pspu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NA29_06650
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pspu02022]
    NA29_06650
Two-component system [BR:pspu02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   NA29_06650
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA_16 HTH_50 AAA HTH_30 HTH_Tnp_ISL3 AAA_7 TIP49
Other DBs
NCBI-ProteinID: AJC18628
LinkDB
Position
520782..522131
AA seq 449 aa
MYKNLQILFVEDDELVRRATLQSLQLAGLDAFGLASAEAARERITPDFAGIVVSDIRLIG
MSGLELLAHLRQHAPEVPVILVTGHGDISMAVQAIRDGAYDFIEKPFAPDRLIESAKRAL
ETRKLMLENQALRRELAEQGGRASRIIGRSPSMETLRTLIANVAMTDAPVLINGDTGTGK
ELVARSLHELSRRRDAPFVALNCGALPEAIFESEMFGHEVGAFTGAAKRRVGKLEHASGG
TLFLDEIESMPAALQVKLLRVLQDGVLERLGSNQSIRVDCRVVAAAKGDMEALVREGTFR
RDLFYRLNVVTLALPPLRERREDILPLFEHFMLDAAVRYGRPAPVVSDRMRQELLQSDWP
GNVRELRNAADRLVLGVASAPEGESLAPLPLKEQVERFERAVLQEALEHSKGNVAATAEA
LHVPKATLYEKLKRYGLHTRGHGEGGDGR
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgtacaagaacctccaaatcctatttgtcgaagacgacgaacttgtgcggcgtgccacg
ctgcaaagcctgcaactcgccgggctcgatgccttcgggctggcgtcggccgaggcggcg
cgagagcgcatcacgccggactttgccggtattgtcgtgtcggacattcgtctgatcggc
atgagcgggctcgaattgcttgcgcatctgcgtcagcacgccccggaagtgccggtcatt
ctcgtcaccggtcatggcgatatctcgatggcggtgcaagccattcgcgacggcgcttat
gacttcatcgagaagcccttcgcgccggaccgtctgatcgagtcggccaagcgtgcgctg
gaaacgcgcaagctcatgctggagaatcaggcgctgcgtcgtgaactggcggagcagggc
ggacgcgcctcgcgcatcatcggacgcagcccgtcgatggagacgctccgcacgctgatc
gccaacgtcgccatgacggatgctccggtgctcatcaacggcgacaccggcaccggtaag
gagttggtcgcccgcagtctgcatgagttgtcgcgtcgccgcgatgcaccgttcgtcgcg
ttgaactgcggtgcactacccgaggcgatcttcgagagcgagatgttcggccacgaggtc
ggtgcgtttaccggcgcggcgaaacgtcgtgtcggcaagctggagcatgcgtcggggggt
acgttgtttctcgacgagatcgagagcatgcccgcagcattgcaggtgaagttgctgcgc
gttttgcaggacggcgtactggagcgtctcggatcgaatcagtcgattcgtgtggactgc
cgcgtggtggccgccgccaagggtgacatggaagcgctcgtgcgcgaggggacgttccgt
cgagacctcttctaccgcttgaatgtggtgacgcttgcgctgccgccgctgcgcgagcgt
cgtgaagacattctgccgttgttcgaacatttcatgctcgatgcggccgtgcgttacgga
cgccccgcaccggtggtgtcggaccggatgcgtcaggagttgctccagtcggactggccg
ggcaacgtgcgcgaattacgcaacgcggctgaccgtctcgtgctgggtgtggcgagtgcg
ccggaaggggagtcgctcgcgccgctgccgctcaaggaacaggtggagcggttcgagcgg
gcggtgcttcaggaggcgctggaacacagcaagggcaacgtggccgcgacggctgaggca
ctacatgtgccgaaggcgacgctgtatgaaaagctcaagcgctatggcttgcatacgcgc
ggacacggcgaggggggcgacgggcgttga

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