Pandoraea sputorum: NA29_08870
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Entry
NA29_08870 CDS
T03554
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspu03000
]
NA29_08870
Transcription factors [BR:
pspu03000
]
Prokaryotic type
Helix-turn-helix
Other families
NA29_08870
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
HTH_3
TetR_N
HTH_24
HTH_31
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AJC18693
UniProt:
A0A239SC19
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Position
complement(1013904..1014749)
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AA seq
281 aa
AA seq
DB search
MLNRIEATLTQLRPSERKLATYVLDAPREVVDLSMNELAERANVSQPTIARFCQAVGCSG
YREFKIRLAQGIAQGVPFVHRDVRPDEPVPGIASKVLDRTIGSLMQVRNNLSPDSIGQAI
ELLASARRIEFYGAGASGIAAQDMQHKFFRLGVPAVAYSDPHVYGMSAALLKEGDVVVAI
SNTGRTQDLLEATQLARTAGASVIAITHSNSPLARQASVALFADVDEDTDVYSPLTSRIA
HLAIGDVLAVGMALRLGDRLPSQLARAKEVINRRRTANDGK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaccgaatcgaagccacgctgacccaattgcgcccgtccgagcgcaagctcgcg
acctacgtgctggacgccccgcgcgaagtcgtcgatctgtcgatgaacgaactcgccgag
cgcgccaacgtcagccagccgacgattgcccgcttctgtcaggcggtgggatgcagcggc
taccgcgaattcaagatccgtctggcgcaaggcatcgcgcagggcgtgccgttcgtgcac
cgcgacgtgcgtccggacgagcccgtgccgggcatcgccagcaaggtactcgaccgcacc
atcggcagccttatgcaggtacgcaacaatctctcgcccgacagcatcggccaggcgatc
gaactgctcgcctcggcacgacgcatcgagttctacggcgcaggcgcgtcgggcatcgcg
gcgcaggacatgcagcacaagttcttccgcctcggtgtgcccgcagtcgcttacagcgat
ccgcacgtatatggcatgtcggcggcactcctcaaggaaggggacgtcgtcgtggcgatc
tcgaatacggggcgcacgcaggatctgctcgaagccacgcaactggcgcgcacggcaggc
gcgagtgtgatcgccatcacgcacagcaattcaccgctggcgcggcaggccagtgtggcg
ctgttcgccgacgtcgacgaagacaccgacgtgtattcgccgctgacctcacgcatcgcc
catctcgctatcggcgacgtgctcgcggtcggcatggcgttgcgtctcggggatcggctg
ccatcgcaactggcgcgggccaaggaagtcatcaaccggcgacgcacggcgaacgacggc
aagtag
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