KEGG   Pandoraea sputorum: NA29_08990
Entry
NA29_08990        CDS       T03554                                 
Name
(GenBank) EscD/YscD/HrpQ family type III secretion system inner membrane ring protein
  KO
K03220  type III secretion protein D
Organism
pspu  Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:pspu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pspu02044]
    NA29_08990
Secretion system [BR:pspu02044]
 Type III secretion system
  Type III secretion core apparatus
   NA29_08990
SSDB
Motif
Pfam: Yop-YscD_ppl_3rd CHAD Ring_hydroxyl_A Y4YQ_C
Other DBs
NCBI-ProteinID: AJC16166
LinkDB
Position
complement(1036281..1037564)
AA seq 427 aa
MPLPAGPLTIGSGEADIAMTLDDEVDVTLHVEEDRVSLISHTPVWVDGMPVTATDDASDA
RPLPLHTVIDLAGLGVWLGDDTQPLPTPLPKRPARCLPPSTTVEAADVPDVAASRGTPRQ
RRSPAAWLAISGLSLLMAGAGVAMWRTGTANVISRPPQPDAFRALAARIAPNVSINTAGD
AVRLSGGCIDDDTRARLRAEARWLGKALSDDTWCTANAIQTVSTLLRLHGFVNAHVNVAA
DGAMVVGGPLVADARWRAASDALDTLALPHGWRVANGTAHSFDQLVKTLREAGQLHGVDI
SRDRNGWRITGALSDGRQASLKGLANTWNRSADAMPLRIDPLPPRIPTLAETGFSAPLVS
IGGSPGAPQLTLADGTRLAQGVRLPGGTRIVAIHADGVSIGAYDRLFYLPLTPTTPETQH
DDPSDPP
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgccgcttccggccggaccgctcaccatcggaagtggcgaggccgacattgcgatgacg
ctcgacgacgaagtcgacgtcaccctgcatgtcgaggaagatcgcgtcagtttgatctcg
cacactcccgtctgggtcgacggcatgccggtcacggcgaccgacgacgcgtccgacgcc
cgcccacttccccttcataccgtgatcgatcttgcgggcctcggcgtgtggctcggcgac
gacacccagccgttacccacgccactgccgaagcgtcccgcgcgctgcctccctccgtcc
acaacggtggaagccgcagacgttccggacgttgccgcctcaaggggcacccccagacaa
cgccgctcgcctgccgcctggctggcaatttcgggtctgtcgctgctgatggctggcgcg
ggtgtcgctatgtggcgcaccggcaccgccaacgtcatctcccgtcccccgcaacccgat
gcgttccgggcgctggccgcccgcatcgcgcccaatgtctcgatcaatactgcaggtgac
gccgtgcggctgtcgggcggttgtatcgacgacgacacgcgcgcccgcttacgtgccgaa
gcacgctggctcggtaaagcgttgagcgacgacacctggtgcaccgcgaatgccatacag
acggtgagcacgctgctgcggctgcatggtttcgtcaatgcacatgtcaacgtggctgca
gacggtgcgatggtcgtcggtggcccgctcgttgccgatgcccgttggcgcgctgcgtcg
gatgcgctggacacactcgcgttgcctcatggatggcgcgtggcgaacggcaccgcccat
agcttcgaccagttggtgaaaacattgcgcgaggcaggtcaactgcacggagtcgacatc
tcgcgcgaccgtaacgggtggcggattaccggtgcgttgtctgacggacggcaagcgtcg
ctcaagggcctcgccaacacgtggaatcgttcggccgacgccatgccgctacgcatcgac
cccctgccgccgcgcattccgacactggccgagacgggcttctccgcgccgctcgtcagc
attggcggctcgccgggtgcaccgcagctcacgcttgccgacggcacccgtcttgcgcag
ggcgtccgcctgcctggcggcacgcgcatcgttgccattcatgccgacggcgtgtcgatc
ggtgcctacgaccgcctcttttaccttcccctgacacccactaccccggagacccaacat
gacgatccgtctgacccgccttga

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