Pandoraea sputorum: NA29_09515
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Entry
NA29_09515 CDS
T03554
Name
(GenBank) ethanolamine utilization protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pspu
Pandoraea sputorum
Pathway
pspu03030
DNA replication
pspu03430
Mismatch repair
pspu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NA29_09515
03430 Mismatch repair
NA29_09515
03440 Homologous recombination
NA29_09515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspu03032
]
NA29_09515
03400 DNA repair and recombination proteins [BR:
pspu03400
]
NA29_09515
Enzymes [BR:
pspu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NA29_09515
DNA replication proteins [BR:
pspu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NA29_09515
DNA repair and recombination proteins [BR:
pspu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NA29_09515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
APD12677
LinkDB
All DBs
Position
complement(1159508..1161139)
Genome browser
AA seq
543 aa
AA seq
DB search
MQVFENVVEDANVVSIPPEGIDPDALARSLPAPMVFVDLETTGGNALEDRITEIGVVEVG
PHGIEQWSTLLDPAEPIPPFIQKLTGITNEMVRGQPSFDTLAQGLAERLHGKLFVAHNAR
FDYGFLKNEFRRAGIGFQADVLCTVRLSRLLFPSAARHGLDALIARFGLAPQGRHRALAD
ADLLWQFWQKLHTLYTPDLIGQAVQRVTKRSSQPPQLPDEAIDALPASPGVYLFYGEGDT
LLYVGKSVDVRARVRSHFSSDHQVAKDLRISQEIRRVEVRRTVGELGALLLESQLVKQLQ
PVHNRMLRRSASLYSWQLTQESDTPQLVSAKTVDFSGAESLYGTFSSRNGAESALRALAD
EHRLCCAQLGLEKVAKGRPCFGYQVKRCDGVCVGAAPLSEHTQRMREALATLRLETWPYD
GPIAIQEHGDNDVEYHVIDRWQYLGSVASRDALDALVDNMPAATGFDPDIYRLLGRRLAA
LRAAQSTAPAPLTVLHLTRPAFRLSQVERPDAAPRKPRSVALLRRRQPRPEDPDQLRLPF
DVR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
ctgcaagtgttcgagaacgtggtcgaagacgccaatgtcgtatccatcccacctgaaggg
atcgatccggacgcgctcgcccgttcactgcccgcaccgatggtcttcgtcgatctcgag
acgacgggcggcaatgcacttgaagaccgcatcaccgaaatcggcgtagtcgaagtcggc
ccccacggcatcgaacagtggagcacgctgctcgaccctgccgagccgatcccgcccttc
attcagaagctgacgggcatcaccaacgagatggtgcgcgggcagccctctttcgacacg
ctcgcacaggggcttgccgaacgtctgcacggtaagctgttcgtcgcgcacaacgcccgc
ttcgattacggctttctcaagaacgaattccgccgcgcgggcatcggttttcaggcggat
gtcctttgcacggtgcgtctgtcgcgcttgctgtttccgtcggccgcccggcatgggtta
gacgcgctgattgcgcgcttcggcctcgcaccgcaaggccgccaccgcgcgctggccgac
gccgacctgctctggcagttctggcaaaaactccacacgctctatacgcccgacctgatc
ggacaagcggtgcaacgcgtgacgaagcggtcgagccagccgccgcaattgccggacgaa
gccatcgacgcgctgcctgccagtccgggcgtctatctcttctatggcgaaggcgacacg
ttgctgtatgtcggcaagagcgtggatgtccgtgcgcgcgtgcgctcgcacttctccagc
gatcatcaggtcgccaaggatctgcgcatctcgcaggaaatccggcgcgtcgaagtgcgg
cgcacagtgggagaactcggtgcgctgttgcttgaatcgcagttggtcaaacagttgcag
ccggtgcacaaccggatgctgcggcgttccgcaagtctctacagttggcagttgacgcag
gaaagcgacacgccgcagttggtgagcgcaaagacggtggacttttccggcgccgaatcg
ctgtacggcacgttctcctcgcgcaacggtgcagagagcgcgttgcgtgcgttggccgac
gaacatcgtctgtgctgcgcgcaactggggctggaaaaggtcgcgaaggggcgtccttgc
ttcggctatcaggtcaaacgttgcgacggcgtgtgcgtgggcgccgcgccgctgtcagag
cacacgcaacgcatgcgcgaagccctcgcgacgctgcgactggaaacgtggccctacgac
ggccccatcgccatccaggagcatggggacaacgacgtcgagtaccacgtcatcgaccgg
tggcagtatctgggcagcgtggcgtcgcgcgatgcattagacgcgctggtcgacaacatg
cctgccgcgacgggcttcgaccccgacatctaccgcttgctgggccgacgtcttgctgcc
ttacgggcggcgcaatccacggcccccgccccgttgacggtgctgcacctcacccgtccg
gcgtttcgtctgagtcaggtcgagcgccccgacgctgcgcccaggaaaccgcgaagtgtg
gcgcttttgcgtcgccgtcagccacgccccgaagatcccgaccagcttcgactgccgttc
gacgtccggtag
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