Pandoraea sputorum: NA29_10355
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Entry
NA29_10355 CDS
T03554
Name
(GenBank) hypothetical protein
KO
K19666
LuxR family transcriptional regulator, quorum-sensing system regulator SolR
Organism
pspu
Pandoraea sputorum
Pathway
pspu02020
Two-component system
pspu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NA29_10355
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NA29_10355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspu03000
]
NA29_10355
Transcription factors [BR:
pspu03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
NA29_10355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_28
HTH_20
HTH_10
HTH_24
DUF6555
HTH_38
PF0610-like_N
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AJC18748
LinkDB
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Position
complement(1349515..1350216)
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AA seq
233 aa
AA seq
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MHLLEAMDKDCNGITDAQTLFQRIDAFSKRIGFEYTCYGFRSHHSATQSELHIFDTYPPG
WMDYYAKHNFIEVDPTVVVGQHSDRLVIWRDPSLPPANAFWEAASRFGLNHGVARSSWGP
HGEFGLLNFGRTHPPLDATEIASLRVGMGAIANYTHEAMSRLLRPKRPPFDIDALSMRER
EVLLWTAEGKTADEIGQILGISARTVNFHIRNCLDKTGCRNKVQSAIRLVMWR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgctcgaagcaatggataaggactgcaacggcattaccgatgcgcaaacattg
tttcagcgcatcgatgcgttctccaaacggattggcttcgagtacacgtgttacggcttt
cgcagccatcacagcgcaacgcagtcggagctgcatatcttcgacacgtatccgccgggt
tggatggactattacgcaaagcataatttcatcgaagtcgacccgaccgtggtcgtgggc
cagcacagcgaccgcctggtgatctggcgcgatccgtcgctacctccggcgaacgctttc
tgggaagccgcttcgcgattcggactcaatcatggcgtcgcccgatctagctgggggccg
cacggcgaattcgggctgctgaatttcggacgcacgcaccccccactagatgccactgag
atcgcttcgttgcgtgtggggatgggggcgattgcaaactatacgcacgaggcaatgagc
cgccttctgcggccgaaacgcccccctttcgacatcgacgcactctctatgcgcgaacgt
gaggtgctactgtggaccgcagagggaaagacggccgacgagatcggccaaatcctcggt
atttccgcacgaacggtcaattttcacatccgcaactgtctcgacaaaacgggatgccgc
aacaaggttcaaagtgccatacggcttgtcatgtggcgttga
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