Pandoraea sputorum: NA29_12095
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Entry
NA29_12095 CDS
T03554
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pspu
Pandoraea sputorum
Pathway
pspu03420
Nucleotide excision repair
pspu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NA29_12095
03430 Mismatch repair
NA29_12095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspu03400
]
NA29_12095
Enzymes [BR:
pspu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NA29_12095
DNA repair and recombination proteins [BR:
pspu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NA29_12095
MMR (mismatch excision repair)
Other MMR factors
NA29_12095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AJC16584
UniProt:
A0A239SDS3
LinkDB
All DBs
Position
1757354..1759672
Genome browser
AA seq
772 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQQGHVGPAGILAVTF
TNKAAKEMQARLGAMLPISTRAMWIGTFHGLCNRMLRAHFRDAGLPQSFQILDQSDQLSA
IKRMMKAANVDDEKFPPKNLQYFINNAKEQGLRPHEVEANDAFNQKFVELYASYQEQCQR
EGVVDFAELLLRCFELLKHNEPLRVHYQSRFRHILVDEFQDTNKLQYAWLKMLAGTQAAV
FAVGDDDQSIYAFRGANVGNMADFEREFRVRHLIKLEQNYRSHGNILDAANALISNNARR
LGKNLRTDAGHGEPIRVYEAATDLQEASWLVEEIKALVAQGLSRQDVAILYRSNAQSRVM
EHALVGAGIAYRVYGGLRFFERQEVKHALAYLRLIENPNDDTAFVRVVNFPTRGIGARSL
EQLADAARLYNCSMYAAVPYMTGKAGTNLLAFVRMIEQMRHATERLTLPEVVTHVIDASG
LITHYQTEKEGQDRIENLQELVHAATAFIAEEGYGLDAPARLIAMRPALPGAPDVLASPD
GVVDADTPVEMTPLAGFLSHASLEAGDNQAEAGQDAVQLMTVHAAKGLEFTAVFVTGLEE
GLFPHENSALELDGLEEERRLMYVAITRAKERLYLSFTQSRMLHGQTRYNVRSRFFDEIP
EEVLKFLTPRAQPGARLSQSEPAWGRDWFSRPQVSAPKDEWAATKSEQALADRSRASETG
FKLGQGVFHTKFGEGKIIGLEGTGDEARAHVKFGRHGEKWLALAVAKLQPIE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaatctgaaccccgaacaactggccgccgtcacgcttcccgac
gagccggccctcattctcgcgggcgcgggttccggcaagacgcgcgtgctcacgacccga
atcgcctggctgatccagcaggggcacgtcggcccggcgggcattctggcggtgaccttt
actaacaaggccgccaaggaaatgcaggcccggcttggcgcgatgctgccgatcagcacg
cgcgccatgtggatcggcacctttcacgggctgtgcaaccgcatgctgcgcgcgcatttt
cgcgacgccgggctgccgcagagcttccagatcctcgaccagtccgatcagctctccgcc
atcaagcggatgatgaaggcggcgaatgtcgacgatgagaaatttccgccgaaaaacctg
cagtatttcatcaacaacgcgaaggaacagggcttgcgaccgcatgaagtcgaggccaac
gacgcgttcaaccagaagttcgtcgaactgtacgcgagctaccaggagcaatgccagcgc
gagggcgtggtcgatttcgccgaactgctgctgcgctgcttcgaactgctcaagcacaac
gagccgctgcgcgtgcattaccagtcgcgctttcgccatatcctcgtcgacgagttccag
gacaccaacaagcttcagtacgcgtggctgaaaatgctcgccgggactcaggccgccgtg
ttcgctgtgggtgacgacgatcagagtatctacgcgtttcgtggtgccaacgtcggcaat
atggctgacttcgagcgtgaatttcgcgttcgtcacctgatcaagctggagcagaactat
cgctcgcacggcaacattctcgacgccgccaacgcgctgatttccaacaacgcgcgacgt
ctgggcaagaatctgcgcaccgacgcgggccatggtgagccgattcgcgtgtatgaagcg
gcgaccgacctgcaagaggccagttggctcgtcgaagaaatcaaggcgctggtcgcgcag
ggcctgtcgcgtcaggacgtggcgattctgtatcgcagcaacgcccagtcgcgggtgatg
gaacatgcgctggtcggcgcgggtatcgcctaccgtgtgtacggtggcctgcgctttttc
gagcgtcaggaagtcaagcacgcgctggcgtatctgcgtctgatcgaaaatccgaacgac
gacacggcgttcgtacgtgtcgtcaatttccccacgcgcgggatcggcgcacgttcgttg
gagcaactggccgacgcggcgcgtctctataactgctcgatgtacgcggctgtgccttat
atgacgggcaaggcggggaccaatctgctggcgtttgtgcgcatgatcgaacagatgcgc
cacgccaccgagcggctcacgctgccggaggtggtgacgcacgtcatcgacgcgagcggg
ctgattacgcactatcagaccgagaaggaaggacaggaccgcatcgagaacttgcaggaa
ctggtccatgccgccacggccttcatcgctgaagaaggctacgggctggacgcaccggcg
cgtctgatcgcgatgcgccccgcactgccgggcgcacctgacgtgctggcgtctcccgat
ggcgtggtcgacgccgatacgccggtggagatgaccccgctggcaggcttcctctcgcac
gcatccctcgaggcgggcgacaaccaggccgaagccgggcaggatgccgtgcaactgatg
acggtgcacgcggccaagggactggagttcacggcggtgttcgtcaccggtctcgaagag
gggctgttcccgcacgaaaatagtgcgctcgaactcgacggactcgaagaggagcgccgt
ctgatgtacgtggcgatcacgcgcgcgaaggagcgtctgtacctgtcgttcacgcaaagc
cgcatgctgcatggtcagacgcgctacaacgtgcgctcgcgcttcttcgacgaaatcccc
gaggaagtgctgaagttccttacgccgcgtgcgcagccgggggcgcgtctgagtcaaagc
gaaccggcttgggggcgcgactggttctcgcgtccgcaagtcagcgcgccgaaggacgaa
tgggcggcgacgaagtcggagcaggcgctggccgaccgctctcgcgcgtcggagacgggt
ttcaagctggggcagggcgtgttccacacgaagttcggcgaaggcaaaatcatcggcctg
gagggcacgggcgacgaagcgcgtgcgcatgtgaagttcggccgtcacggcgagaagtgg
ctggcgttggctgtggcgaagcttcagccgatcgagtga
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