Pandoraea sputorum: NA29_12160
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Entry
NA29_12160 CDS
T03554
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pspu
Pandoraea sputorum
Pathway
pspu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NA29_12160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspu03400
]
NA29_12160
Enzymes [BR:
pspu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NA29_12160
DNA repair and recombination proteins [BR:
pspu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NA29_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF6847
Motif
Other DBs
NCBI-ProteinID:
AJC16595
UniProt:
A0A239SDY2
LinkDB
All DBs
Position
1774414..1774686
Genome browser
AA seq
90 aa
AA seq
DB search
MAKTAKSQDAAPEAPQDLPETYEAALAELEQLVGRMEGGELGLEESLGAYRRGAVLVKYC
QGLLEKVEQQVKVLEGETLKPLEASSRDEF
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggccaagactgcaaagtcgcaagacgcggcgcccgaggcgccgcaagacctgcccgag
acctatgaggctgcgctggctgagctcgagcagctcgtcggacgcatggagggcggtgag
ctgggactggaagaatcgttaggcgcgtatcggcgcggcgccgtcctggtgaagtactgc
cagggtctgctcgagaaggtcgagcagcaggtgaaggtgctcgaaggcgagacgctaaag
ccgctcgaagcgtcgtcgcgcgacgagttctaa
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