Pandoraea sputorum: NA29_12905
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Entry
NA29_12905 CDS
T03554
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pspu
Pandoraea sputorum
Pathway
pspu03030
DNA replication
pspu03430
Mismatch repair
pspu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NA29_12905
03430 Mismatch repair
NA29_12905
03440 Homologous recombination
NA29_12905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspu03032
]
NA29_12905
03400 DNA repair and recombination proteins [BR:
pspu03400
]
NA29_12905
Enzymes [BR:
pspu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NA29_12905
DNA replication proteins [BR:
pspu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NA29_12905
DNA repair and recombination proteins [BR:
pspu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NA29_12905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Peripla_BP_3
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AJC16685
UniProt:
A0A239SES4
LinkDB
All DBs
Position
complement(1971729..1972349)
Genome browser
AA seq
206 aa
AA seq
DB search
MQTVAILDFETTGLSPTQGDRATEIAVILLRDGQIVDRYQSLMNAGRRIPSDVAALTGIT
NDMIAAAPPVSQVMREAAQFVGNCPVVAHNAGFDKRFWQAELAMLGARSDHVFACTMLTA
RRLYPHAQNHRLSSLADLLQLPKTGRAHRAMVDAEMTTHLWRRMHDDISRTYGLRHVDHA
LIARVQTTSKDKVPTLLRSLAQGAGH
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgtagcgatcctcgactttgaaaccaccggcctttcgcccacgcaaggcgac
cgggcaaccgaaatcgccgtcatcctgctgcgcgacggccagatcgtcgatcgttaccag
agtctgatgaatgccggacggcgcattccgtccgatgtcgccgcgctcacgggcattacc
aacgacatgatcgcagcggcaccgcccgtctcgcaggtcatgcgcgaggctgcacagttc
gtcggcaactgtccggtcgtcgcgcacaacgccgggttcgacaagcgtttctggcaagcc
gaactcgccatgctgggcgcgcgctcggatcacgtcttcgcctgcacgatgctgaccgcc
agacgcctctaccctcacgcccagaatcaccgcctctccagcctcgccgatctcctccag
ctcccgaagaccggtcgtgcccaccgggcgatggtcgacgccgagatgacgacgcacctc
tggcgtcggatgcacgacgacatctcgcgcacctacggcctcaggcacgtggaccacgcg
ctgatcgcccgcgtgcagacgacgagcaaggacaaagtgccgacgctgctgcgttcactc
gcgcaaggtgcaggacactaa
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