Pandoraea sputorum: NA29_12925
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Entry
NA29_12925 CDS
T03554
Name
(GenBank) hypothetical protein
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pspu
Pandoraea sputorum
Pathway
pspu00020
Citrate cycle (TCA cycle)
pspu00190
Oxidative phosphorylation
pspu00650
Butanoate metabolism
pspu00720
Other carbon fixation pathways
pspu01100
Metabolic pathways
pspu01110
Biosynthesis of secondary metabolites
pspu01120
Microbial metabolism in diverse environments
pspu01200
Carbon metabolism
Module
pspu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pspu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pspu_M00149
Succinate dehydrogenase, prokaryotes
pspu_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NA29_12925
00650 Butanoate metabolism
NA29_12925
09102 Energy metabolism
00190 Oxidative phosphorylation
NA29_12925
00720 Other carbon fixation pathways
NA29_12925
Enzymes [BR:
pspu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NA29_12925
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
FAD_binding_3
HI0933_like
FAD_oxidored
GIDA
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AJC16687
UniProt:
A0A239SEQ8
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All DBs
Position
1977997..1979751
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AA seq
584 aa
AA seq
DB search
MKVIDCDVVVVGGGGAGTYAALRLHDLGLKPMLISKGLVGKSGASIMAGAVIVGSKMLGG
NAQNAASSLEFFAKYYSHFLVDQSYLAAAGHWIENTFYPEMESLGLLFSREADGQIAMSH
SPVRWAVAPMQGQTGMLLMDIRRKQLQARGIPMHEECVVTALLRNENGEVCGLTALDYVR
GEMFAVHARAVVMATGHADRMVRRSTGTREQTGDGIALALRAGAEMTNLEMQFWHISDFA
HPPTWQRLHIYPNPLVGTNQSSRVYNAQGECFFEQSRDAPAALAPYTLQVKRLTQQVLAG
KARFSGGYYTSYSHVDADVLRRYQYAGSAFEKLGLDITRDKVEARPTMHYRQGGIESDPH
SMRTSVDGLWVAGGVGAHVTGSLAVAIYDGGLVAESIAGSLPDRHRHDGLTEQQIRAEES
RVEGVRLRADAGGQTADGETGRQALAPMHVKTGIWDVMDAAYGLIKSGEAMRAGLARLAA
MRERELPRMTPPSTSRRFNTAWLDALDAHNLIDVCEVTLQSALKREESRGSFYRTDFPYV
DNTAWQCKNIVALDGGAYRFRRERYPEGAIAPGFERQEYFSVPW
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgatcgattgcgatgtcgtagtcgtgggcggcggcggtgcgggcacctatgcc
gcgctccgtctgcacgacctgggattgaagccgatgttgatatcgaaggggctggtcggc
aagagcggtgcgtcgatcatggccggagcggtgatcgtcggctcgaagatgctcggcggc
aacgcgcagaacgccgccagttcgctcgaattcttcgcgaagtactacagccactttctg
gtcgatcagtcctatctggcggcggcggggcactggatcgagaacaccttctatcccgag
atggagtcgctcggtttgttgttttcgcgggaggccgacgggcagatcgcgatgagccac
tcgccggtgcgctgggcggtcgcgccgatgcaggggcagaccggcatgttgctgatggat
atccgacgcaagcagttgcaggcgcgcggcattccgatgcatgaggagtgtgtcgtgacg
gcgctgctgcgcaacgagaacggcgaagtttgcgggctgactgcgctcgactacgtgcgc
ggcgagatgttcgcggtgcatgccagggccgtcgtgatggcgaccgggcacgctgaccgg
atggtgcgtcgctccacgggaacgcgggagcagaccggcgacggcattgcgctggcactg
cgcgcgggggctgagatgactaatctggagatgcagttctggcacatcagcgactttgcg
catccaccgacgtggcagcgtctgcacatctatccgaatccgcttgtcggcacgaatcaa
agttcgcgcgtgtacaacgcgcaaggcgagtgcttcttcgagcagtcgcgcgacgcgcct
gccgcgctcgcgccgtacacgcttcaggtcaagcgactcacgcaacaggtgctcgcgggc
aaggcacgcttcagtggcggctattacacgtcatacagccacgtcgatgcggatgtgtta
cggcggtaccagtacgccggttctgcgtttgaaaagctggggctcgacatcacgcgcgac
aaggtcgaggcgcgccccacgatgcattaccggcaaggcggtatcgagtcggatccccat
tcgatgcgcaccagtgtcgacggattgtgggtcgcagggggcgtgggcgcgcatgtcacg
gggagtctggccgtcgcgatttacgacggtgggctggtggccgagtcgattgctggcagc
ttgccggaccgacatcgtcacgatggcctgaccgagcagcagattcgggcagaagaatcg
cgggtggagggggtgaggctcagggcggatgcgggcggccagacggctgacggcgagacc
gggcggcaggcgctcgcccccatgcacgtcaagacgggcatctgggacgtgatggacgcg
gcatacggattgatcaagagcggggaggccatgcgcgccggtctggcgaggcttgccgcg
atgcgagagcgcgaactgccgcgcatgacaccgccgagcacctcgcgccggttcaacacc
gcgtggctcgatgcgctcgacgcccacaacctgatcgacgtgtgcgaagtcacgctgcaa
agcgcgttgaagcgagaagaaagccgaggcagtttctaccggacggactttccgtacgtc
gataacaccgcatggcagtgcaagaacatcgtcgcgctcgacggcggcgcttatcggttc
cggcgggagcgctaccccgagggagccatcgcgcccggattcgagcgacaggagtatttc
agcgtgccgtggtga
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