Pandoraea sputorum: NA29_16995
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Entry
NA29_16995 CDS
T03554
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspu03032
]
NA29_16995
03036 Chromosome and associated proteins [BR:
pspu03036
]
NA29_16995
03400 DNA repair and recombination proteins [BR:
pspu03400
]
NA29_16995
DNA replication proteins [BR:
pspu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NA29_16995
Chromosome and associated proteins [BR:
pspu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NA29_16995
DNA repair and recombination proteins [BR:
pspu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NA29_16995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AJC17239
UniProt:
A0A239SJR3
LinkDB
All DBs
Position
2916278..2916556
Genome browser
AA seq
92 aa
AA seq
DB search
MNKQELIDAVAGVTGASKAQTGETIDALLETVKKAVAKGDSVQLIGFGSFGSGKRAARTG
RNPKTGEAIKIPAAKTVKFTAGKAFKDAVNKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaggaactaatcgacgccgtcgctggtgttacgggtgcaagcaaggctcaa
actggcgaaaccatcgacgctctgctcgagaccgtcaagaaggcagtcgccaagggtgac
tcggttcagttgatcggcttcggctcgttcggttcgggcaagcgcgctgcgcgtaccggc
cgcaacccgaagactggcgaagcgatcaagatcccggcagccaagaccgtgaagttcacg
gctggcaaggcgttcaaggacgctgtgaacaagaagtaa
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