Pandoraea sputorum: NA29_17885
Help
Entry
NA29_17885 CDS
T03554
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspu03016
]
NA29_17885
Enzymes [BR:
pspu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NA29_17885
Transfer RNA biogenesis [BR:
pspu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NA29_17885
Prokaryotic type
NA29_17885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AJC17373
UniProt:
A0A239SJS6
LinkDB
All DBs
Position
complement(3123460..3124446)
Genome browser
AA seq
328 aa
AA seq
DB search
MTDPRSQAPRQKLPRFPLDGVLLLDKPLGLSSNDALIKAKRLLQALKAGHTGTLDPLATG
LLPLCFGEATKFSQDLLEADKTYEARVRLGETTTTGDAEGEVLQARPVTVDEAAIRAVLP
RFTGPISQVPPMYSALKRDGKPLYEYARAGQTLEREARNVTIHLLEMTACALPDENEFTF
RVTCSKGTYVRTLAEDIGEALGCGAHLRALRRTAVGPLTLDGAVTLDDLSVLDHAQRVEK
LAPVDALLKTLPVVSLDETLAKRFSHGQRLRLDEVRCPQALRECAASHDGIEVKVYAEAT
ADATARLLGVARLDGEALLTPQRLLKTQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacggacccgcgttcgcaggcaccccgccaaaaacttcctcgtttcccgctcgacggc
gtgttgttgctcgacaagccgctgggcctgtcgtccaacgatgccctgatcaaggccaag
cgtctgcttcaggcgttgaaggcggggcataccggtacgctcgatccgctcgcgacggga
ttgctgccgttgtgttttggcgaggcgacgaagttctcgcaggacttgctcgaagccgac
aagacgtacgaagcgcgcgtgcgtctcggtgagacgacgacgacgggcgacgcggaaggg
gaggtgctgcaagcgcgtccggtgacggtggacgaagcggcgattcgtgcggtactgccg
cgctttactggtccgatttcgcaggtcccgccgatgtattccgcgcttaagcgcgacggc
aaaccgttgtacgaatatgcgcgtgctgggcagacgctcgaacgtgaagcccgcaacgtc
acgatccacttgctggagatgacggcatgcgcattgccggacgagaacgaattcaccttc
cgcgtgacgtgcagcaagggcacttatgtgcgcacgctggcggaagacatcggcgaagcg
ttgggatgtggcgcccatctgcgcgcgttgcgccgcacggcggtcggcccgctgacgctc
gatggcgcggtgacgctcgatgacctgagcgtgcttgatcatgcacaacgtgtggagaag
ctcgcgccggtcgatgcattactcaagacgctcccggtggtgtcgctcgacgagacgtta
gctaagcggttcagtcacggccagcgtttgcgtcttgacgaggtgcgatgcccgcaagcg
ctgcgcgagtgcgctgcgtcgcatgacggcatcgaggtgaaggtctacgccgaagccacc
gccgatgcgaccgcccgactgttgggcgtcgcccgactggacggcgaagcgctgctcaca
ccgcaacggttgctgaagacgcaataa
DBGET
integrated database retrieval system
