Pandoraea sputorum: NA29_17900
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Entry
NA29_17900 CDS
T03554
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspu03021
]
NA29_17900 (nusA)
03009 Ribosome biogenesis [BR:
pspu03009
]
NA29_17900 (nusA)
Transcription machinery [BR:
pspu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NA29_17900 (nusA)
Ribosome biogenesis [BR:
pspu03009
]
Prokaryotic type
rRNA transcription factors
NA29_17900 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
AJC17376
UniProt:
A0A239SLX6
LinkDB
All DBs
Position
complement(3128154..3129629)
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AA seq
491 aa
AA seq
DB search
MSREVLLLVDALAREKNVDKDVVFGALEAALASATKKRYSEDVDIRVHIDRESGEHESFR
RWLVVPDEAGLQEPDKQILSFEAKEDDPSLEVGDFVEEAVESVEFGRIGAQAAKQVILQR
IRDAEREQILSDFLERGEKIMTGTVKRLDKGNLIVESGRVEALLRRDQLIPKENLRIGDR
VRAYIVKVDRTARGPQIELSRTAPEFLIELFGMEVPEIEQGLLEIKSAARDPGMRAKIAV
VAYDKRIDPIGTCVGIRGTRVQAVRNELGGENVDIVLWSEDPAQFVIGALAPAAVQSIVV
DEEKHSMDVVVDENELAVAIGRSGQNVRLASELTGWQINIMTPDESAEKQNEERGTLRTL
FMQRLDVDEEVADILIEEGFSSLEEIAYVPLNEMLEIEAFDEDTVHELRNRARDALLTQA
IATEERVEGVALDLKSLDGMTPELLAKLAEHEIQTRDDLAELAVDELTEMTGVDEEAAKA
LIMKAREHWFQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcgaagtattgctgttggtcgatgcgctcgcgcgcgaaaagaacgtcgacaag
gatgtcgtgttcggcgcgcttgaagcggcattggcttcggccacgaagaagcgctacagc
gaagacgtcgacattcgcgtgcacatcgaccgtgagtcgggcgagcacgagagctttcgt
cgctggttggtagtgccggacgaagcgggtctgcaggagccggacaagcagattctgtcg
ttcgaagccaaggaagacgatccgtccctcgaagtcggcgacttcgtcgaagaggcggtg
gaatcggtcgagttcggccgtatcggtgctcaggcggccaagcaagtgattctgcaacgc
attcgcgatgccgagcgcgagcagatcctctccgacttcctggagcgcggcgagaagatc
atgaccggcacggtcaagcgtctcgacaagggcaacctgatcgtcgagtcgggccgtgtg
gaagcactgctgcgtcgcgatcaactcatcccgaaggaaaacctgcgtatcggtgaccgc
gttcgcgcgtacatcgtgaaggtggaccgcacggcacgcggcccgcagatcgaactctcg
cgtaccgcgccggaattcctgatcgagctgttcggcatggaagtgccggaaatcgagcaa
ggtctgctggagatcaagtcggcggctcgtgacccgggcatgcgcgccaagatcgctgtg
gtggcttacgacaagcgtatcgacccgatcggcacctgtgtgggcattcgcggcacgcgt
gtgcaggctgtgcgtaacgaactcggtggcgagaacgtcgacatcgtgctgtggtcggaa
gaccccgcgcaattcgtgatcggcgcgctggcgccggcggcggtgcagtccatcgtcgtg
gacgaagagaagcacagcatggacgtcgtcgtcgacgagaacgaactggcggtggcgatc
ggtcgcagcggtcagaacgtgcgtctcgcgtcggaactgactggctggcagatcaacatc
atgacgccggacgaatcggccgagaagcagaacgaagagcgcggcacgctgcgcacgttg
ttcatgcagcgtctcgatgtggacgaggaagtggcggacatcctgatcgaggaaggtttc
tcgagcctggaagagatcgcctacgtgcccctgaacgaaatgcttgaaatcgaagcgttc
gacgaggacacggtccatgagctgcgcaatcgtgcacgcgacgcattgctgacgcaggcg
attgccaccgaggagagggttgagggcgttgcgctcgatctgaagagcctcgacggcatg
acgcccgagttgctggccaagctggccgagcatgaaattcagacgcgcgatgatctggcc
gagctggccgtcgacgaactgaccgaaatgaccggcgtcgacgaggaagccgcaaaggcc
ctgatcatgaaagcgcgagagcactggttccaatga
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