Pandoraea sputorum: NA29_19025
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Entry
NA29_19025 CDS
T03554
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pspu
Pandoraea sputorum
Pathway
pspu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NA29_19025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspu03000
]
NA29_19025
03400 DNA repair and recombination proteins [BR:
pspu03400
]
NA29_19025
Enzymes [BR:
pspu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NA29_19025
Transcription factors [BR:
pspu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NA29_19025
DNA repair and recombination proteins [BR:
pspu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NA29_19025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
Motif
Other DBs
NCBI-ProteinID:
AJC17534
UniProt:
A0A239SMJ7
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All DBs
Position
3380329..3381825
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AA seq
498 aa
AA seq
DB search
MKLDPDVCYKAVSARDRRFDGWFFVGVSSTGIYCRPVCNVRTPRFENCSFYGSAAAAEKA
GYRPCLKCRPELAPGGARFDASRELADAAAAMIDEGFLNHAPLPDLAARIGITERHLRRI
FADEFGVSPVEYAQTQRLLLAKRLLTDTALPVTEVALAAGFGSVRRFNGLFKSRYGFAPG
RLRLNAHNARMAAIPDGDLVFQLAYRPPLAWHALLDFLGDRAIDGVESREGDVYTRTLSL
QRQDGQTVAGWCRISPLTNRHALQVTLPPVLAGSVPQVLGKLRHLFDLGARPDVIDAHLG
PLALATPGLRVPGTVDGFEIAVRAIVGQQITVKGARRLLGRLAERFGTPLPTPVHGLTHT
FPSAAQMLAVPVDALGEAGIIRSRIAAIHGVAQAIVDGKLRLDPLAPLDATMASLLAIKG
VGPWTAQYIAMRALGSPDAMPVDDLVLRQALGVPNGRAVEARAAQWAPWRAYAALHVWRA
AAQGPAGQPVMNLQEVVA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgatccggatgtctgctacaaagcagtctcagcacgcgaccgacgcttcgac
ggctggttcttcgtcggcgtctcctcgaccggcatttactgccgccccgtctgtaacgtt
cgcacgccccgcttcgagaactgctcgttctacggtagcgccgccgccgcagaaaaggcc
ggataccgcccctgcctcaaatgccgccccgaacttgcacccggtggcgcacgcttcgac
gcctcccgcgaactcgccgacgccgccgccgccatgatcgacgaaggctttctcaatcac
gccccactgcccgatctcgccgcccgcatcggcatcacggagcgccacctgcgacgcatc
ttcgccgacgaattcggtgtctcccccgtcgaatacgcccagacgcagcgactgctgctc
gccaaacgcctgctcaccgataccgcgctgccggtgacggaggtcgcgcttgccgctggc
ttcggtagcgtcagacgcttcaacggactcttcaaatcacgctatggcttcgcccccgga
cgcctgcgcctgaacgcacacaacgcccgcatggccgccattcccgacggcgatctggtc
tttcaactcgcctatcgccctcccctcgcatggcacgccctcctcgactttctcggcgac
cgcgccatcgacggcgtcgagtcccgtgaaggcgacgtctatacccgcacgctgagcctc
cagcggcaggacggacagaccgtcgcgggctggtgccggatctcgccactcacgaatcgc
cacgccctacaggtgacgcttccccccgtcctcgcaggcagcgtgccgcaagtgctcggc
aaactccgccatctgttcgatctcggagctcgccccgatgtcatcgatgcccacctcggc
cccctcgccctcgccacgcccggccttcgcgtgccaggcaccgtggacggcttcgagatc
gccgtgcgcgccatcgtcggccagcaaatcaccgtcaagggcgcacgccgcctgctcgga
cgactcgccgagcgattcggcactccactgccgacacccgtccacggtctgacgcacacg
tttccgagtgccgcacaaatgctcgccgtacccgtcgatgccctcggggaagccggtatc
attcgaagtcgtatcgccgcaattcacggtgttgctcaagcgattgtggacggcaagctg
cggctcgatccgctcgcaccgctggacgcgacgatggcgtcgctcctcgccatcaaaggc
gtcggcccgtggacagcgcaatacatcgcaatgcgcgccctcggctcgccggacgccatg
ccggtggacgatctggtgctgcgtcaggcgctcggcgtacccaacggccgcgccgtcgag
gctcgcgccgcccagtgggcaccgtggcgcgcgtacgccgcattgcacgtctggcgtgct
gcggcacaaggaccggctggccagccggtcatgaatttgcaggaggtggttgcatga
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