KEGG   Pandoraea sputorum: NA29_20300
Entry
NA29_20300        CDS       T03554                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pspu  Pandoraea sputorum
Pathway
pspu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pspu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NA29_20300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pspu03021]
    NA29_20300
Transcription machinery [BR:pspu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NA29_20300
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 GerE HTH_24 PhyR_sigma-like HTH_10 HTH_40 HTH_7 HTH_29 HTH_Crp_2 DUF2089 DUF434 TnsD HTH_IclR
Other DBs
NCBI-ProteinID: AJC17727
UniProt: A0A239SNN3
LinkDB
Position
3661151..3661669
AA seq 172 aa
MQTQGTLPSTVEMLYCHHHSWLRGWLHRRLGSAEQAADIAHDTFVRLLGSERGPAAFDEP
RAYLTTVAQNLVSNHWRRQKLERAYLDALAQVPREVEWSPETRAIMLETLLELDRLLDGL
PTVVRQAFLYSQLDGKTHAQIAATLGISIPTVKRYLAKALQRCYFADLSFLD
NT seq 519 nt   +upstreamnt  +downstreamnt
atgcaaacccagggcaccctcccctctaccgtcgagatgttgtactgccatcaccattcg
tggctgagggggtggttgcatcgacgtctgggcagtgccgaacaagcggcggacatcgcg
cacgacaccttcgtgcgattgctcggcagcgagcggggccccgccgcgttcgacgaaccg
cgcgcgtatctcacgaccgttgcacagaatctcgtctcgaatcactggcgacgtcagaag
ctcgaacgcgcatatctcgatgcactcgcacaggtgccgcgcgaagttgaatggtcgccc
gaaacgcgcgccatcatgcttgagacgctactggaactggatcgactcctggacggcctg
ccgaccgtcgtgcggcaggcgtttctgtattcgcagctcgacggaaaaacgcacgcccag
atcgcggccacgctcggcatctcgattccgacggtcaagcgctatctcgcgaaagccttg
cagcgctgctatttcgccgacttgtcttttctcgactga

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