KEGG   Pandoraea sputorum: NA29_22835
Entry
NA29_22835        CDS       T03554                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
pspu  Pandoraea sputorum
Pathway
pspu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pspu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NA29_22835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspu03019]
    NA29_22835
Enzymes [BR:pspu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     NA29_22835
Messenger RNA biogenesis [BR:pspu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     NA29_22835
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-ProteinID: AJC18087
UniProt: A0A239SP58
LinkDB
Position
4255575..4257023
AA seq 482 aa
MSFDSLGLIDPLLRNLQDLNYETPTPVQAKAIPAVLAGKDVMAAAQTGTGKTAGFALPLL
QRLVQLGPQVASNRARVLVLVPTRELAEQVLQSFVAYGKGLGLRFLAAYGGVSINPQMMK
LRKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQR
QTLLFSATFTDDIRTMAANILREPVDISVSPRNATASKIKQWVIPVDKRNKPDLFMHLVA
ENDWKHALVFVKTRNGVDYLAGVLDEAGYSVDTIHGDKPQPARLRALERFKTGEVQMLVA
TDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAIE
ALIQQTLRREEEPGFEAEHRVPETSATGQIIKKPKKPKKPKVQSLPQGELGKQPASGKKA
APQHGEKKRKPATQRPASTGNSPKPASGNPFSGQKARSKPAKDSVANLLRPAGKTASGRG
KR
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgtcttttgactcgctgggtctgatcgatccgttgctgcgcaatttgcaggatctcaac
tacgagacaccgacgccggtgcaggcgaaggcgattcctgccgtcctcgcgggcaaggac
gtcatggcggccgcgcagaccggtacgggcaagacggcgggtttcgcactgccgctgttg
cagcgtctcgtgcaactcggaccgcaagtggccagcaaccgggcgcgcgtgctggtgctg
gtgcccacgcgcgaactggcggaacaagtgctgcaaagcttcgtcgcgtacggcaagggg
cttggcttgcgatttcttgcagcctacggcggcgtgagtatcaatccgcaaatgatgaaa
ctgcgcaagggcgtggatgtgctggtggcaacaccgggtcgtctgctggaccttaatcgt
cagaacgccgtgcagttcgatcaggtgcagacactggtgctcgacgaagccgatcgcatg
ttggatctcggcttcgcacgcgaactcaacgcggtattcgcggcgctcccggcccagcgt
cagacactgttgttctccgcgacgtttaccgacgacattcgcacaatggccgcgaacatt
ctgcgcgagccggtcgatatcagcgtgagtccgcgcaacgccacggccagcaagatcaag
cagtgggtcatcccggtagacaagcgtaacaagccggatctcttcatgcatctggtcgcc
gagaatgactggaaacatgcactggtgttcgtgaagacgcgcaatggcgtggactatctg
gcgggcgttctggacgaagcgggctattcggtcgacaccatccacggcgacaagccgcag
ccagcacgactgcgtgcgctggagcgcttcaagacaggggaagtgcagatgctggtggcg
accgacgtcgccgcgcgcgggctggacatcgacgacctgccgctcgtcatcaacgtcgat
ctgccgatcgtggcgcaggactacgtgcaccgaatcggccgcaccggtcgcgcgggggcg
agcggcgtggccgtatcgctcgtgtgcgccgacgaagcgccacaactggccgccatcgaa
gcactgatccagcaaacactgcgtcgcgaggaagaacccggcttcgaagccgagcaccgt
gtgccggagaccagcgcgacggggcaaatcatcaagaagccgaaaaagccgaagaagccg
aaggtgcagagccttccgcaaggcgagctcggcaagcaacccgcgtccggcaagaaggcg
gcgccgcaacacggcgagaagaagcgcaaacccgcgacacaacgcccggcgtcgacgggc
aacagcccgaagcccgccagcggcaacccgttcagcggacaaaaggcacgcagcaaaccg
gcaaaagactccgtcgcgaatttgcttaggcccgccggtaaaacggcaagtggtcgcggc
aaacgttga

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