Pandoraea sputorum: NA29_23025
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Entry
NA29_23025 CDS
T03554
Name
(GenBank) diguanylate cyclase
KO
K02034
peptide/nickel transport system permease protein
Organism
pspu
Pandoraea sputorum
Pathway
pspu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NA29_23025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspu02000
]
NA29_23025
Transporters [BR:
pspu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NA29_23025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
AJC19205
LinkDB
All DBs
Position
complement(4297949..4298815)
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AA seq
288 aa
AA seq
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MAVAASAERLPRRRYRGLRKFARNKAAVAGAIIVAFAVLVAMLAPWISPYDPIATSFMAV
RQAPSALHWFGTDELGRDILARMIYGAQASLAAGVVSVGIAVIVGVPLGLLAGYFGRWVD
AIVSRLADALLSIPFLILAIAMAAFLGASLTNAMIAIGVSAMPRFVRLARAQALTVKAEE
YVEGARAIGLTDTRIIVRYILPNVLPPIIVQASLTVATAIIAEASLSFLGLGQLPPLPSW
GSMLNTAKDFVEQAPWMSIFPGIAIFLTVLGFNLLGDGLRDALDPREQ
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtcgccgcgagcgcggagcgcctgccgcgccgtcgctatcgcgggctgcgcaag
tttgcgcgcaacaaggcggcggttgccggggcgatcatcgtcgcgttcgcggtgcttgtc
gcaatgctcgcgccgtggatctcgccctacgacccgattgccactagtttcatggcggtg
cgtcaggcccctagtgcgctgcactggttcggcaccgacgaactgggccgcgacattctc
gcgcgcatgatctacggcgcgcaggcgtcgctggccgccggtgtggtgtcggtcggtatc
gcggtgatcgtgggcgtgccgctcgggctgctggcgggctactttggccgctgggtcgac
gccatcgtctcgcggctggccgacgcgctgctgtccattccgttcctgatcctggccatt
gcgatggcggcgtttctcggggcgagcctgaccaacgcgatgattgccatcggcgtgtcc
gccatgccacgtttcgtccggctggcacgcgcgcaggcgctcaccgtgaaagcggaagag
tatgtcgagggggcccgtgccatcggcctcacggatacgcgcatcatcgtgcgctacatc
ctgccgaacgtgctgccgccgatcatcgttcaggccagtctcacggtcgcgaccgcgatc
atcgccgaggcgagcctgtcgttcctcggactggggcaactgccgccgctgccgtcgtgg
ggctcgatgctcaacacggccaaggacttcgtcgagcaggcgccctggatgtccattttt
cccggtatcgccattttcctgacggtactcggcttcaacctgctgggtgacggactgcgc
gacgcgctggatcctcgcgagcaataa
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