Pandoraea sputorum: NA29_23045
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Entry
NA29_23045 CDS
T03554
Symbol
dppD
Name
(GenBank) dipeptide ABC transporter ATP-binding protein DppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
pspu
Pandoraea sputorum
Pathway
pspu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NA29_23045 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspu02000
]
NA29_23045 (dppD)
Transporters [BR:
pspu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NA29_23045 (dppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
APD12562
LinkDB
All DBs
Position
complement(4302507..4303538)
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AA seq
343 aa
AA seq
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MTMPADAGPVLEVTGLSLKFSKAPDAPNLIDGVSFAVHPGKTLCIVGESGCGKSVTSLAL
MGLLPSPPANLVAGRAVFEGRDLLALDERDFADLRGNRLAMIFQEPMTSLNPSFTIGHQI
EEGIRRHRGLDRRAARAEALDMLKLVRIPAPETRLDNYPHELSGGMRQRVMIAMALANRP
ALLIADEPTTALDVTIQAQVLTLIQTLQRETGTAVVLITHDLGVVAEVADDVAVMYAGRI
VEYGTVSEIFDDPQHPYTIGLMGAIPSIGKREGTLATIRGAVPSPERMPAGCRFAPRCPF
AEARCTREAPPERTLTGAHRVACWLAPVESLTPPPSLREEAVA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcccgcagatgctgggccggtgcttgaagtcaccggactgtcgctgaaattc
tccaaggcacccgacgcgccgaatctgatcgatggcgtctctttcgccgtgcaccccggc
aagactttgtgcatcgtcggcgaatcgggatgcggcaagagcgtgacgtcgctggccctc
atgggtttgttgcccagcccgccggcgaacctcgtagcaggacgcgccgtcttcgaaggc
cgcgacctgctggcgctggacgaacgcgatttcgcggacctgcgtggcaaccgtctggcg
atgatctttcaggagccgatgacgtcgctcaatccgtcgttcacgatcggccatcagatc
gaggagggcattcggcgacatcgcggactggaccgacgcgccgcgcgtgccgaagcgctc
gacatgctcaagctcgtgcgcattcccgcgcccgaaacccggctcgacaactatccgcac
gagctctccggcggcatgcgccagcgcgtgatgatcgcgatggcgctcgccaaccggccc
gcgctactcatcgccgacgagcccacgacggcgctcgacgtcacgattcaggcgcaggtg
ctcacactcattcagacgttgcagcgcgaaaccggcaccgccgtcgtgctcatcacgcac
gatctgggcgtggtggccgaggtcgcggacgacgtggccgtgatgtacgccgggcgcatc
gtcgagtacggcacggtgagcgagatcttcgacgatccgcagcacccttacaccatcggg
ctgatgggcgcgattccgtccatcggcaaacgcgaaggcacgctggcgacgattcgcggc
gcagtgccctcgccggagcgcatgcctgccggatgccgttttgcgccgcgttgcccgttc
gccgaggcgcgttgcactcgtgaggcgccgcccgagcggacattgaccggcgcgcaccgc
gtggcgtgctggctcgcgccggtcgagtcactcactccgccgccgtcgttgcgagaggag
gccgtggcatga
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