Pandoraea sputorum: NA29_23720
Help
Entry
NA29_23720 CDS
T03554
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pspu
Pandoraea sputorum
Pathway
pspu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NA29_23720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspu03400
]
NA29_23720
Enzymes [BR:
pspu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NA29_23720
DNA repair and recombination proteins [BR:
pspu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NA29_23720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJC18209
LinkDB
All DBs
Position
complement(4464212..4467646)
Genome browser
AA seq
1144 aa
AA seq
DB search
MLHLFFSNRFTTLEAALLRDIAQAPDASPGAGNPFETETIVVPSVAVRRRLELDYADVFG
VCANVRLTYLAQWLWDMAGKLLTVPESSPFAPDRLVWPLYQCLAQPWGESSPRLAGYLAG
ADDVMRFELADRLAHIYDQYLTYRPDWLERWQSGEFISPGASTTWGEVQRADEAWQSALW
RQVLAHLEIRERHPTLRAIDRIEQLTPETVPVGWPSRVCVFALSSMPPLSMALLKAMSRL
IDVHLYVLNPCESYWFDIVPPSRLSYLTQRDGKAHREVGHPLLAEWGRQTQSHIDALYAD
LAPQAVEDRALFQPNPEPTLLAALQNGILSLDDGRHGAPDGVAADGSVQVHVCHSLARQI
EVLHDRLLACFDEIPDLRPDDVLITVPDLGRAAPLIDAVFGTATPRIPYLVTGLPPTRTN
PVARAFASILALPQQRVAASSLVELARTEAVAQRYDLGGNVLDAIQNWLHSAGARRGWRG
DALLRLDGTGQKSSDRTMTRAGADIPPALERHTLGDAMMRLFLGYALPDDAMPVDDWLPV
GGIEGGRAELLGQLARLIDDLDMTAVSLQTERTGLAWRDQLLAMLELFFSDEPRFADDVA
EVRMAIEQIGTAIADGAPEVRVPVEVVARVLADALDDPTRGGVPSGRVTFAAIPSLRLLP
YRVVCMIGMDDGVLPGRVRADEFDLMRALPQRGDRQRRDDERNLFLDLMLSAQDRFLITY
TGRSVRDNAPLPPSTVVDELLDFTGQLLAPASQGFDLDEQRKARETLVVLHPLQPFSPAY
FDGRKPSLYSYDVANGEAAQQLVGQLASPAPDAAELPFVHEPLPAIAQTHLTLDDLLRFW
RHPGRAWARDRLGLSLGDMLTEVEDEEPFVLDWSGRDALAARLLPRLLRDDGRDPQAQAA
AIERIANVSHELPGGATGAVWRRRELGGLRALATQVRQAQADGTQELLVTLPLKPALPPS
WTGSTDAIWHGDATLCADCLLQGRLAPVSRHGLVMYRYGSMRPSDLLAAWLAHLALCAHL
QQPEHAGLEVAPRTLWYGEDETFALRPVDDAAALLAQWVALYRLGQTRPLPFFVRSAWKL
ASTGKMTDTESAWSGSAFARGDADDPYTKLIWRGVEDPLASPFDLLANTMFGPMVQHLEI
VEGA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctattcttctccaaccggttcaccacgctcgaagccgccctgttgcgcgac
atcgcacaggcccctgatgcgtcgccgggggcagggaatccctttgagacggaaaccatt
gttgtgcccagcgtggcggtgcgccgccgactcgagctggactatgcggacgtcttcggc
gtttgtgcaaacgtccgcctgacgtatctggcgcaatggctttgggacatggcaggcaaa
ctgctcaccgtgccggaaagttcgccgttcgcgcccgaccggctggtctggccgctgtac
cagtgtctcgcgcagccgtggggggagtcgtcgccgcggctggcgggttatctggccggg
gcagacgacgtcatgcgattcgagttggccgatcgactggcccacatctacgatcaatac
ctgacttaccggccggactggctggagcggtggcaatccggtgaattcatttcgccgggg
gcgtcgacgacctggggcgaagtccagcgtgccgacgaggcttggcaaagcgccttgtgg
cggcaggtactggcgcatctggagattcgcgagcgccacccgacgctgcgggccatcgac
cgaatcgaacagctcactccggagacggttccggtcggctggccgtcccgggtttgcgtg
ttcgcgctgtcgtcgatgccgccactttcgatggcgttgctcaaggccatgtctcgcctg
atcgacgtgcatctttatgtcctcaatccctgcgagagctactggttcgacatcgtgccg
ccgtcgcggctgtcgtatctgacccaacgcgacggcaaggcacaccgcgaggtggggcac
cccttactggcggaatggggacggcagacgcagtcgcacatcgatgcgctgtacgcggac
cttgcgccgcaagcggtggaagaccgggcgctgtttcagccgaatccggagcccacactg
ctggccgccttgcagaacggcattctttccctggacgatggtcgtcatggcgcacccgac
ggcgtcgcggccgatggctcggtgcaggtgcacgtctgccatagccttgcgcgtcagatc
gaggtgctgcacgaccgcctgctggcgtgcttcgacgaaattcccgatctgcgtccggac
gatgtgctgattaccgtgccggaccttggtcgtgcggcaccgctcatcgatgcagtgttc
ggcaccgcaacgcctcgtattccttatctggtaaccggcttgccgccgacgcggaccaac
cctgtcgcacgtgccttcgcgtcgattcttgcattgccgcagcagcgggtggcggcgtcg
agccttgtcgaactcgcgcgtacagaggcggtagcccagcgttacgacctgggcggcaat
gtgctcgacgccattcagaactggttgcacagtgctggcgcacgccggggctggcgcgga
gacgccttgctgcggcttgacggcactggacagaagtcaagcgatcgcacgatgacccgc
gccggtgcggacataccgcctgcgttggagcgccacacgctgggcgacgccatgatgcgc
ctgttcctcggctacgccttgccggacgacgccatgccggtcgacgactggttgcctgtc
ggcgggatcgaaggcggcagggccgagttgctggggcaactggcgcggctgatcgacgat
ctcgatatgacggcggtgtcactccagactgagcgtactggcctcgcgtggcgcgatcag
ttgctggcaatgctggaactgttcttctcggatgagccgcgtttcgccgatgacgtcgcc
gaagtgcgtatggccattgaacagatcggtacggccattgccgacggcgcgcctgaggtg
cgcgtgccggtggaagtggtggcgcgcgtgctggccgacgcgctcgacgatccgacgcgc
ggtggggtgccgtcgggacgcgtgacgtttgccgcgattccaagcttgcgtctgttgccg
taccgcgtggtctgcatgatcggcatggacgatggcgtgttgcccgggcgcgtgcgcgcc
gacgagttcgatctcatgcgtgcgctgccacaacgtggcgaccgtcagcgtcgcgatgac
gagcgcaatctgttcctcgatctgatgctgagtgcgcaggaccgctttctcatcacctat
acggggcgaagcgttcgcgataacgcgccgttgccgccgtctacggtcgtggacgaattg
ctggacttcacggggcaattgctcgcgccggcatcgcagggattcgacctcgatgagcaa
cgcaaagcccgtgagacgcttgtcgtactgcatccgcttcaaccgttctcgcccgcgtac
tttgacgggcgtaagccgtcgctgtacagctatgacgttgctaacggcgaggcggctcag
caactggttggccaattggcatcgcctgcaccggacgcagccgaattgccgttcgtccat
gagccattgcccgccattgcgcagacgcatctgacgctggacgacttgctacgcttctgg
cgtcacccggggcgggcgtgggcacgcgaccggctgggcttgtcgctcggtgacatgctc
accgaagtcgaagacgaagagccgttcgtactcgactggtcggggcgcgacgcgctcgcc
gcgcggttgctgccgcgactgttgcgcgatgacggtcgggatcctcaggctcaggcggcg
gcgatcgagcgcattgcgaacgtcagtcatgagctgccaggaggtgcgacgggtgcggta
tggcgtcgacgtgaactcggtggactgcgcgcactggccacgcaagtgagacaagcgcag
gcagatggcacacaggaattgctggtgaccttgccgctcaagcccgcgctcccaccgtcg
tggacgggatcgacggatgcgatctggcacggcgatgcgacgctgtgcgcagactgcttg
ctgcaagggcgtctggcgccggtttcgcgccacggactcgtcatgtatcgctatggcagc
atgcgtccgagcgatctgcttgcggcctggctcgcccacctcgcgctatgtgcacatttg
cagcaaccggaacatgcggggcttgaggtcgcgccacgaacactctggtatggagaggac
gagacatttgcgctgcgtcccgtggacgatgcggcggcactgctcgcgcaatgggtggcg
ttgtatcgcctggggcagacccggccgttaccgttctttgtgcggagcgcatggaagctg
gcgagcactgggaaaatgacagataccgaaagcgcatggtccggctctgcattcgctcgc
ggcgatgccgatgatccctataccaagctgatctggcggggtgtggaagacccgctggcg
tcgccgttcgacttgttggcgaacacgatgttcggaccgatggtgcaacaccttgaaatc
gtggagggcgcatga
DBGET
integrated database retrieval system
