Pandoraea sputorum: NA29_23860
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Entry
NA29_23860 CDS
T03554
Name
(GenBank) LysR family transcriptional regulator
KO
K16135
LysR family transcriptional regulator, transcriptional activator for dmlA
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspu03000
]
NA29_23860
Transcription factors [BR:
pspu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NA29_23860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_AsnC-type
YdaS_toxin
HTH_24
P22_Cro
DUF2089
HTH_5
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AJC18228
UniProt:
A0A239SR99
LinkDB
All DBs
Position
complement(4502541..4503461)
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AA seq
306 aa
AA seq
DB search
MDAIADLEFFARLVTLGSLSALARDLGVTPPAISARLSQLERRLGVKLLNRTTRRLAMTH
EGELYLGTGSKIIEQVQELERMVSSSRDLPRGLLKVNATFGFGRRHVVPALSEFREQYPE
VEVQLDLTDRPMNLAEFAFDVGIRFGELPDQRVVGRRIAANRRLVCASPKYLARHGVPKV
PDDLRNHLCIVLRENDTAYGTWHFTKGKRHELVKVHGAMSSNDGEATLRWALDGHGVLVR
SEWDVQSALASNALTQLLSDWALPAADIYAIYPERLNLSAKVRLFVEFMERYLARELNRD
VGETAQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcgccgatctggaattcttcgcccgtctggtgacgttgggcagcctgtcg
gcgctagcgcgtgatcttggcgtgacaccgcctgcgatcagcgcacggctaagccaactg
gagcgacgactcggcgtcaagctgctgaaccgcaccacccggcgtctggcgatgacgcac
gagggggagctgtatctcggtaccggctcgaagatcatcgaacaggtgcaggagctggag
cgcatggtgtcgagcagccgcgatctgccgcgcggtctgctgaaggtgaatgcgacattc
ggcttcggacgccgccatgtcgtgcctgcgctatccgaatttcgcgagcagtaccccgag
gtcgaagtgcagctcgatctgacggatcgcccgatgaatctggccgagttcgcgttcgac
gtcggcattcgcttcggcgaactacccgaccagcgcgtcgtaggacgccgcatcgcggcg
aaccggcggttggtgtgtgcttcccccaaatacctcgcgcgccacggtgtgccgaaggtg
cccgacgatctgcgcaatcacctgtgcatcgtgctgcgcgagaacgatacggcgtacggg
acatggcatttcaccaagggcaaacgtcacgaactggtgaaagtgcacggggcgatgagc
agcaacgacggcgaagcgacactgcgctgggcgctcgacggccatggcgtactcgtgaga
tcggaatgggatgtgcaatccgcattggcttcgaatgcactgacgcaattgctaagcgac
tgggcattaccggccgccgatatctacgcgatctatccggagcggctcaatctctcggcc
aaggtacggctatttgtcgagtttatggagcgctatctggcgcgtgaattgaatagggat
gtcggcgaaaccgcccaatga
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