Pandoraea sputorum: NA29_24300
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Entry
NA29_24300 CDS
T03554
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pspu
Pandoraea sputorum
Pathway
pspu00061
Fatty acid biosynthesis
pspu00071
Fatty acid degradation
pspu01100
Metabolic pathways
pspu01212
Fatty acid metabolism
pspu02024
Quorum sensing
pspu04146
Peroxisome
Module
pspu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NA29_24300
00071 Fatty acid degradation
NA29_24300
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NA29_24300
09145 Cellular community - prokaryotes
02024 Quorum sensing
NA29_24300
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspu01004
]
NA29_24300
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspu04147
]
NA29_24300
Enzymes [BR:
pspu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NA29_24300
Lipid biosynthesis proteins [BR:
pspu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NA29_24300
Exosome [BR:
pspu04147
]
Exosomal proteins
Exosomal proteins of breast milk
NA29_24300
Exosomal proteins of breast cancer cells
NA29_24300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AJC19245
LinkDB
All DBs
Position
4592500..4594068
Genome browser
AA seq
522 aa
AA seq
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MSSASSLASSLASSLSAFLADLPARIDNLPARIAAQTPSRIALIDDFGRMTYGELTHAVS
TCATRLREHGVRGGDRVMIVGENGIAYVVLLLAVASLDAWPLLCNARLSAAELRVIREHA
QPRCAVYAIDASPDAAAHARTDAAKVAWTELALGALAVSDVDPASVAEPVQSDPSEQCAA
LIYTTGTTGAPKGVRLSHRNLMFIAAVSSTLRRVGPHDIAYGVLPISHVYGLTSVCLGTL
YAGGTLRLAARFTPEAVLDSLAHDGLTILQGVPAMHARLMAYVATQGTTLVAPRLRFVYS
GGSPLDAALKARVEAFYGLPIHNGYGLTESSPTVSQTLLDAPRDDCSVGPVIPGVAVRIV
GLDGKDVTEGDVGELWVRGPNVMLGYYRAPELTAATVTEDGWLRTGDLARRAADGALFLA
GRAKELIIHSGFNVYPIEVEQALASHPDVLQVAVLGRAVDGNEQVIAFVEARPGHEIDVE
ALAGWAAQRLAPYKRPAQIRVLDALPAASTGKVLKHKLKAML
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttcggcctcgtccttggcttcgtccttggcttcgtccttgagcgcgttcctcgcc
gacttgccagcgcgcatcgataatcttcccgcgcgcatcgccgcgcaaacaccgtcgcgc
atcgcactgatcgacgacttcggccggatgacgtacggtgaactgacgcatgccgtgagc
acgtgtgcaacgcgcctgcgcgagcatggcgtcagaggtggtgatcgagtgatgatcgtc
ggcgagaacggcatcgcgtatgtcgtgctgctgcttgccgtcgcctcgctcgacgcatgg
cctctgctctgcaacgcccgcctctctgccgccgagttgcgggtgattcgcgagcacgcg
caaccacgttgtgccgtctacgccatcgacgcatctccggacgctgccgcgcacgcgcgc
accgacgccgccaaggtcgcctggaccgaactggcgctgggcgcgctggcggtgtccgac
gtcgatcccgcgagcgtggccgaaccagtgcaaagcgatccgtccgaacagtgcgcggcg
ctgatttacacaacaggcacgaccggtgcgcccaagggcgtgcggttatcgcatcgcaat
ctgatgttcattgcggcggtgtcgagcacgttgcgacgcgtcggcccgcacgacatcgcc
tatggcgtactacccatctcgcacgtctacggattgacttccgtgtgtctcgggacgtta
tacgcgggtggcacgttgcgtctcgccgcgcgctttaccccggaggcggtgctggactca
ctcgcgcacgacggactgacgattctgcaaggtgtgcccgccatgcatgcgcgcctgatg
gcgtatgtggccacgcaaggcacgacgctcgtcgcgccgcgtctgcgctttgtctactcc
ggcgggtcaccgctcgacgctgcgctcaaggcgcgtgtcgaagcgttctacggtctgccc
atccacaacggttatggccttaccgagagcagtccgaccgtctctcagaccttgctggac
gcgccacgcgacgactgctccgtcggccccgtcattccgggcgtcgcggtgcgcatcgtg
ggactcgacggcaaggatgtgaccgagggtgacgtcggtgaactgtgggtacgcggaccg
aacgtcatgctcggctattaccgcgcgccggaactgacggccgcgaccgtgacggaagac
ggctggctgcgcactggcgatctcgcccggcgtgccgcagacggcgcgttgtttctcgcc
ggacgcgcgaaagaactcatcatccactcgggctttaacgtctatccgattgaagtcgag
caagcgctggcgagtcatcccgacgtgcttcaggtggccgtgctcggacgtgctgtcgac
ggcaacgaacaagtgattgcatttgtggaagcgcgtccgggacatgagatcgacgtcgaa
gcgcttgcaggatgggccgcacagcgactcgcgccgtacaagcgtcccgcgcagattcgc
gtgctcgacgccttgcctgccgcatcgaccggcaaagtgctcaagcacaagctcaaggcg
atgctctga
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