Pandoraea sputorum: NA29_24985
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Entry
NA29_24985 CDS
T03554
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pspu
Pandoraea sputorum
Pathway
pspu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NA29_24985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspu03400
]
NA29_24985
DNA repair and recombination proteins [BR:
pspu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NA29_24985
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NA29_24985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AJC18392
UniProt:
A0A239SUK0
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Position
complement(4735403..4736404)
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AA seq
333 aa
AA seq
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MATSELDTSRDDVDTPDAVAPPGDTSQATRSARSLPASSEAVGARPARPKSTRTRAVDDD
ASEAFQQAQANTDTVKREARRTRRAPSPARVAEREQSRVTEQPGFVLHSYPYRETSLIID
VLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLAWLGKGELRTLTKAEWVGGLRPLEG
DALLSGFYLNELLVKFCARDDPHDKLFQHYLTTLHHLAHGEPAGVILRAFERVLLRETGY
AVAFDRCTQTRGKVVPDRRYVFHPDWGVRPARGDEPSDWPVVGGQTLLDMEQDDYSRAQT
VQQSKLLMRFLLNHHLGGVPLNTRQILLDLQKL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggctacgagtgaactggatacttcacgtgacgatgtcgacacgccggatgccgtagcg
ccaccgggcgacacgtcacaagccacgcgatcggcgcgatctctgccagcctcgtcggag
gcggtgggggcccggcccgcacgtccgaagagcacgcgcacgcgtgccgtggacgacgat
gcctcggaagccttccagcaagcgcaggcgaacaccgataccgtcaagcgcgaagccaga
cgcacacgccgcgcgccgtcccccgcccgggtggccgagcgcgaacaaagccgggtgacg
gaacaacccggctttgtgcttcacagctatccctaccgcgaaaccagcctgatcatcgat
gtgctcacgcgcgaccacgggcgtattgcgctcgtcgccaaaggggcaaagcgtccacat
tccgcactgcgcggtgtgcttcagacgtttcagccgctctcgctcgcgtggctcggcaaa
ggcgagttgcgcacgttgacgaaggctgagtgggtcggcggtttgcgtccgcttgagggc
gacgcgttgctctcgggcttttatctgaacgaattgctggtgaagttctgcgcgcgagac
gatccgcacgacaagctgttccagcactatctgacgacgctgcatcatctcgcgcacggc
gaacctgcaggtgtgatcctgcgcgcgttcgagcgcgtgttgttgcgcgagacgggatac
gccgtggcgttcgaccgttgcacgcaaacgcgtggcaaggtcgtgccggatcgccgctac
gtgtttcaccccgactggggtgtgcgcccggcgcgcggcgacgaaccatcggactggccg
gtcgtcggcgggcagacgctgctcgatatggagcaagatgattactcgcgggcgcagacc
gtgcagcagagcaagttgctcatgcgctttcttctcaaccaccatttgggcggtgtgccg
ctcaatacccggcagatcctgctcgacctgcaaaaactatga
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