Paraburkholderia sprentiae: BJG93_01475
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Entry
BJG93_01475 CDS
T04610
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pspw
Paraburkholderia sprentiae
Pathway
pspw03420
Nucleotide excision repair
pspw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pspw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJG93_01475
03430 Mismatch repair
BJG93_01475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspw03400
]
BJG93_01475
Enzymes [BR:
pspw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJG93_01475
DNA repair and recombination proteins [BR:
pspw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJG93_01475
MMR (mismatch excision repair)
Other MMR factors
BJG93_01475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
AAA_12
HHH
Motif
Other DBs
NCBI-ProteinID:
APA84217
UniProt:
A0A1I9YD34
LinkDB
All DBs
Position
1:complement(2491355..2493343)
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AA seq
662 aa
AA seq
DB search
MSTVAEFAPSFDTAAWLAKLNAAQREAVEYGTDTPDAPPGALLVIAGATTVGARAALAQG
LTWAGTFHSVGARLLREYADLIGLAPAFTINDREDSADLMNLVRHELGLSAKERRFPAKG
TCFAIYSRVVNTGASLGQVLERAFPWCREWEEDLRRLFAAYVDAKQKQSVLDYDDLLLYW
SHMAAEPAIAADLSARFDHVLVDEYQDTNRLQASILFALKPDGRGLTVVGDDAQSIYSFR
GATVRNILDFPAQFEPPARQVTLERNYRSTEPILAASNAVIELASERYTKNLWTDKASAQ
RPRLVTVADDAAQARYVVEQVLEAREQGVKLKSQAVLFRAAHHSAALEIELTRRNIPFVK
FGGLKFLDSIHVKDVLAVLRWAENPRDRVAGFRVVQLLPGVGPATAAKLLDDIVARAGGG
DPVATAGGVLAAFAAPARAREDWHPFVRLMSSVYGRQTPWPAEFEMVRRWYEPHLERNHD
DAAIRHADLLQMESIAGTYASRERFLTELTLDPPDATSDESGVPLIDEDYLILSTIHSAK
GQEWRNVFVLNGVDGCIPSDLGTGSDEEIDEERRLLYVAMTRAKEDLHIVVPQRFYVHNQ
THLGDRHVWASRTRFIATPMLPLFDAYAWPRVPVASAPSAAGLAAAAQAKIEIAAKLRKM
WD
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccgtcgccgaattcgctccgtcgttcgataccgccgcctggctcgcgaagctc
aacgccgcccaacgcgaagccgtcgaatacgggaccgacacgccggacgcgccgcccggc
gcgctactcgtgatcgcgggcgccaccaccgtcggggcccgcgccgcgctcgcgcaaggg
ctgacgtgggcgggcacgtttcatagcgtcggcgcgcggctattgcgcgaatacgcggat
ctgatcggtctcgcgcccgcgttcacgatcaacgaccgcgaagactccgccgatctgatg
aacctcgtgcgccacgagctcgggctgtccgcgaaggagcggcgctttccggcgaagggc
acctgctttgcgatctactcgcgcgtcgtcaacaccggcgcatcgctcggccaggtgctg
gagcgcgcgtttccgtggtgtcgcgaatgggaggaggatctgcgccggctgttcgccgcc
tacgtcgacgcgaaacagaaacagagcgtgctcgattacgacgatctgctgctctactgg
tcgcacatggccgcggagcccgctatcgcggccgatctgtcggcgcgcttcgatcacgtg
ctggtcgacgaatatcaggacaccaaccgcctgcaggcgtctatcctgttcgcgctgaag
ccggacggccgcggcctgaccgtggtgggcgacgacgcgcaatccatctattcgtttcgc
ggcgcgaccgtgcgcaatatcctcgacttccccgcgcagttcgagccgccggcgagacag
gtcacgctcgagcgcaactatcgctcgaccgagccgattctggccgcgtcgaacgcggtg
atcgaactcgcgagcgagcgctacacgaagaatctgtggaccgacaaggcgtcggcgcag
cgcccgcgcctcgtcacggtcgccgacgatgccgcgcaagcccgctacgtcgtcgagcag
gtgctcgaagcgcgcgagcagggcgtgaagctgaagtcgcaggcggtgctgtttcgagcc
gcgcatcacagcgccgcgctagagatcgaactcacgcgccgcaacatcccgttcgtcaag
ttcggcgggctgaaatttctcgactcgatccatgtgaaggacgtgctcgcggtgctgcgc
tgggccgagaatccgcgcgaccgcgtcgccggctttcgggtcgtccagctgctgccgggc
gtcggcccggccaccgcggcgaagctgctcgacgacatcgtcgcgcgcgcgggcggcggc
gatccagtcgcgaccgcgggcggcgtactggccgcttttgcggcgcccgcgcgcgcgcgg
gaagactggcatccgttcgtccggctgatgtcgagtgtgtatgggcggcaaaccccgtgg
cccgccgagttcgagatggtgcggcgctggtacgagccgcacctcgagcgcaatcacgac
gacgccgcgatccgtcacgcggacctgctgcagatggaaagcatcgcgggcacgtatgcg
tcgcgcgagcgtttcctgaccgagctgacgctcgacccacccgatgccaccagcgacgaa
tccggcgtgccgctgatcgacgaggactacctgatcctgtcgacgatccattcggcgaag
ggccaggagtggcgcaacgtgttcgtgctgaacggcgtcgacggctgcattccgtccgat
ctcggcaccggcagcgacgaggaaatcgacgaggagcggcgcctgctctacgtggcgatg
acgcgcgcgaaggaagacctgcatatcgtcgtgccgcagcgcttttacgtgcacaaccag
acgcatctgggcgaccggcatgtgtgggcgtcgcgcacccgcttcatcgccacgccgatg
ctgccgctgttcgatgcctacgcatggccgcgcgtgccggtggcgagcgcgccgagcgcg
gcagggctcgccgcggccgcgcaggcgaagatcgagatcgcggcgaagctcagaaagatg
tgggattga
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