Paraburkholderia sprentiae: BJG93_08315
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Entry
BJG93_08315 CDS
T04610
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pspw
Paraburkholderia sprentiae
Pathway
pspw03030
DNA replication
pspw03430
Mismatch repair
pspw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJG93_08315 (dnaE)
03430 Mismatch repair
BJG93_08315 (dnaE)
03440 Homologous recombination
BJG93_08315 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspw03032
]
BJG93_08315 (dnaE)
03400 DNA repair and recombination proteins [BR:
pspw03400
]
BJG93_08315 (dnaE)
Enzymes [BR:
pspw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJG93_08315 (dnaE)
DNA replication proteins [BR:
pspw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJG93_08315 (dnaE)
DNA repair and recombination proteins [BR:
pspw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJG93_08315 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
RecG_wedge
RMI1_C
Motif
Other DBs
NCBI-ProteinID:
APA85384
UniProt:
A0A1I9YGF1
LinkDB
All DBs
Position
1:944296..947865
Genome browser
AA seq
1189 aa
AA seq
DB search
MSPMSDPRFVHLRVHSEFSIADGIVRLDDIVAAAAKDGQGALALTDLGNAFGLVRFYQEA
RGKGIKPIAGCDVWITNPDDRDKPSRLLLLVKDRRGYLNLCELLSKASLTNQYRGRAEIE
AGWLESGLGEGLLALSGAQQGDVGLALAAGNEEAAKRNARHWAKVFPGGFYIELQRYGQP
GGEQYVQQAVALAASLKLPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRQKRFTA
EQYFRSQQEMAALFADIPSALANSVQIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQL
SKEGLEKRLEQLYPDEAERDAQRATYYQRLEFECGTIIKMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVI
QYVKEKYGANAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIAD
AMKEEPLLQERFDNEDEVHQLLELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGD
ESGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKQDWSLAQVPLDDPA
SFSILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHG
REVVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAK
HREIFAEGAATNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEF
MAANMSLAMDDTDKVKILFEDCLANKMAVLPPDVNLSAYRFEPVAEADGKRSRTIRYGLG
AIKGSGQNAIEEILRAREEGRFIDIFDFCNRVDRRIVNRRTVEALIRAGAFDSLHPNRAQ
LIASVSLAMEAAEQAAANALQAGLFDMGDAPSQGHELVDETEWPEKRKLQEEKAALGFYL
SGHLFDAYKDEVRRFVRQKIGELKEGRDKLVAGVIVSLRTQMTQRGKMLIALLDDGTGQC
EVTVFNEVFEEHKQLFKEDELLVVQGQARNDAFTGGIRFTVDTVMDLGRARCRYADSLKV
QMNGNADAQALRRVLEAHTAGKDEQPSATAAPAAASRGNGGGRGGFGGDGGRQRQAVQIP
NGLAVQVVYRSEHAQGEMRLGDAWRVKPTDELLAALRGEFAGSSIEIVY
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgtcagatccccgcttcgttcatctccgcgttcactccgaattttcgatt
gccgacggcatcgtgcgtctcgacgacatcgtcgcggcggcggccaaagacggtcagggc
gcgctcgcgctcaccgacctcggcaacgcgttcggcctcgtccgtttttaccaggaagcg
cgcggcaaagggatcaaacccattgccggctgcgacgtgtggatcaccaatcctgacgac
cgcgacaagccctcccgtttgctgctgctggtcaaggaccgccgcggttacctgaacctc
tgcgaattgctcagcaaggcctcgctgacgaaccagtatcgcggccgcgcggagatcgaa
gccggctggctcgagtccggtctgggcgaagggctgctcgcgctgtcgggcgcgcagcag
ggcgacgtcggtcttgcgctggcggccggcaacgaagaggcggccaagcgcaatgcgcgg
cattgggcgaaggtgttcccaggcggcttctatatcgaactccagcgctacggccagcct
ggcggcgagcagtacgtgcaacaggcggtcgcgctcgcggcatcgctgaaactgccggtc
gtcgcgacccacccgatgcagttcatgacgccggacgacttcaccgcgcacgaagcgcgt
gtgtgcatttccgaaggcgacattctcgcgaatccgcgtcgccagaagcgctttacggcc
gagcagtatttccgctcgcagcaggagatggccgcgttgttcgcggacattccttcggcg
ctcgcgaacagcgtgcagatcgcgaagcgctgcaatctgacgctcgaactcggcaagccg
aagctgccgctctttccgacgcccgacggcatgtcgctcgacgactacctcgtgcagctg
tcgaaagaaggcctcgaaaagcggctcgaacagctgtatccggacgaggccgagcgcgac
gcgcagcgcgcgacgtattaccagcgcctcgaattcgagtgcggcacgatcatcaagatg
ggctttccgggctacttcctgatcgttgcggacttcatcaactgggccaagaacaacggc
gtgccggtcggtccgggccggggttcgggcgcgggttcgctggtcgcctatgcgctcggc
gtgaccgatctcgatccgctgcgctacaacctgctgttcgagcgtttcctgaatccggag
cgggtgtcgatgcccgacttcgatatcgacttctgccagcacggccgcgatcgcgtgatc
cagtacgtgaaggagaaatacggcgcgaacgcggtgtcgcagatcgcgacgttcggcacc
atggcggcgaaggcggcggtgcgcgacatcggccgcgtgctcgatctcggctacatgttc
acggacggcatcgcgaagctgatcccgttcaagccgggcaagcacgtgacgattgccgac
gcgatgaaggaagagccgttgttgcaggagcgcttcgacaacgaagacgaagtgcatcag
ctgctcgaactcgcgcagcgcgtcgaaggcttgacgcgcaacgtcggcatgcacgcgggc
ggcgtgctgatcgcacccggcaagctgaccgatttctgcccgctgtacacgcaaggcgac
gaaagcggcgtcgtgagccagtacgacaaggacgacgtcgaagcggtcggcctcgtgaag
ttcgactttctgggcctgaccacgctgaccattctggattgggccgagcgctacatccgc
cgcctcgatccgtcgaagcaggactggtcacttgcccaggtgccgctcgacgacccggcg
tcgttctcgatcctgaagaaagcgaatacggtcgccgtgttccagctggaaagccgcggc
atgcagggcatgctgaaggacgcgcagcccgaccgcttcgaagacatcatcgcgctcgtc
gcgttgtaccgcccgggtccgatggacctgatcccgagcttctgcgcgcgtaagcacggc
cgcgaggtggtggaatatccggacccgcgagtcgaacctgttctgaaagagacctacggc
atcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctg
ggcggcgccgacctgctgcgtcgcgcgatgggtaagaaaaagcccgaggaaatggccaag
caccgcgaaattttcgcggaaggcgcggccaccaacggcctcacgcgcgagaagtccgac
gaaatcttcgacctgatggagaagttcgcgggctacggcttcaataagtcgcacgcggcc
gcctacgcgctgcttgcgtactacaccgcatggctgaaggcgcaccatccggccgaattc
atggcggccaatatgtcgctcgcgatggacgacacggacaaggtcaagatcctgttcgaa
gactgcctcgcgaacaagatggccgtgctgccgccggacgtgaacctctccgcctatcgc
ttcgagccggtcgccgaagccgacggcaagcgctcgcgcacgatccgctacggtctcggc
gcaatcaagggcagcggccagaacgcgatcgaagaaatcctgcgcgcgcgcgaggaaggc
cgcttcatcgacatcttcgatttctgcaatcgcgtcgatcggcgcatcgtcaatcgccgc
accgtcgaggcgctgattcgcgccggtgcgttcgactcgctgcatccgaaccgcgcgcag
ctgatcgcgtcggtctcgctcgcgatggaagcggccgagcaggcggcggccaatgcgctg
caagcggggctgttcgacatgggcgacgcgccgtcgcagggccacgaactcgtcgacgaa
acggagtggccggaaaagcgcaagctgcaggaagagaaggccgcgctcgggttctacctg
tcgggccatctgttcgatgcatacaaggacgaagtgcgtcgtttcgtgcgccagaagatc
ggcgagctgaaggaagggcgcgacaagctggtcgcgggcgtgatcgtgtcgctgcgcacg
cagatgacccagcgcggcaagatgctgatcgcgctgctcgacgacggcaccggccagtgc
gaagtgacggtcttcaacgaagtcttcgaagagcacaagcagttgttcaaggaagacgag
ttgctggtcgtgcagggccaggcgcgcaacgacgcattcacgggcggcatccgcttcacg
gtcgacacggtgatggatctcggccgcgcgcgctgccgttacgcggactcgctgaaggtg
cagatgaacggcaacgcggacgcgcaggcattgcgccgggtgctcgaagcgcacaccgcc
ggcaaggacgagcagccgtccgccacggccgcgccggccgccgcgtcgcgcggcaatggc
ggcgggcggggcggcttcggcggcgatggcggccgtcagcgtcaagcggtgcagattccg
aacgggctcgcggtgcaggtcgtctatcgcagcgagcatgcgcaaggcgaaatgcgtctg
ggcgacgcctggcgcgtgaagccgaccgatgaactgctcgccgcactgcgcggcgagttt
gcgggaagctcgatcgagatcgtgtattaa
DBGET
integrated database retrieval system
