Paraburkholderia sprentiae: BJG93_10345
Help
Entry
BJG93_10345 CDS
T04610
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pspw
Paraburkholderia sprentiae
Pathway
pspw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pspw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJG93_10345 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspw03019
]
BJG93_10345 (pcnB)
Enzymes [BR:
pspw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BJG93_10345 (pcnB)
Messenger RNA biogenesis [BR:
pspw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BJG93_10345 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
SAP25
Motif
Other DBs
NCBI-ProteinID:
APA85748
UniProt:
A0A1I9YHG5
LinkDB
All DBs
Position
1:complement(499713..501326)
Genome browser
AA seq
537 aa
AA seq
DB search
MIKKLIRKLFGQDAATADDTLSTDTHAEASADSNANDDPPARGKSASGTTARPRRKSAGA
AAAAQAPREPDVPVIIPHDVHGIDPTLISRNAIRVTEGLQQAGFRAFIVGGAVRDLLFGV
KPKDFDVATDATPEQVQKLFRRARIIGRRFQIVHVQFGQEIIETSTFRALVDPPAADAPP
AKRLKRDELDRRTHAVDASGRVLRDNVWGEQHEDATRRDFTINAMYYDPATQTVLDYHSG
MADMRARLLRMIGDPATRYREDPVRMLRVVRFAAKLDFDIDETTRAPIEKMADLINNVPA
ARLFDEMLKLMLSGHALACLKRLRQEGLHHGLLPLLDVVLEQPTGEKFISLALSNTDARV
LAGKPVSPGFLFATLLWHDVQQRWQKFEAEGEYPVPALHRAMDEVLDMQTEKLAIHKRFS
ADMREIWGLQLRLEKRSGRTALKLLEHQRFRAGYDFLLLRCASGELDESVGAWWTEFIEG
DAAARETLLTQGGKDRSPRKRRRRGGARNRKPGDGVEGGSSAERTDNDAGLEGSHED
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaaactcatccgcaagctattcggccaagacgcggcgaccgctgacgacacg
ctctccaccgacacccatgccgaggccagcgccgacagcaacgctaatgacgatccgccg
gcgcgcggcaagtccgcttccggcacgaccgcacggccgcgtcgcaagtccgccggcgcc
gctgccgccgcgcaagcgccgcgcgaaccggacgtaccggtcatcattccgcacgacgtg
cacggcatcgaccccacgctgatctcgcgcaacgctatccgcgtgaccgagggcctgcaa
caggcgggcttccgcgcgttcatcgtcggcggggcggtgcgcgacctgctgttcggcgtg
aagccgaaagacttcgacgtcgcaaccgacgcgacgcccgaacaggtgcagaagctgttc
cgccgcgcgcgcatcatcggccggcgctttcagatcgtgcatgtgcagttcggccaggaa
atcatcgaaacctcgacgttccgcgcgctggtcgatccgcccgcggccgacgcgccgccg
gcgaagcgtctgaagcgcgacgaactcgaccgccgtacccacgcggtcgacgccagcggc
cgcgtgttgcgcgacaacgtgtggggcgagcagcacgaggacgccacccgccgcgacttc
acgatcaacgcgatgtactacgatccggccacgcaaaccgtgctggactaccacagcggc
atggccgacatgcgcgcccgcctgttgcgcatgatcggcgacccggctacgcgctatcgc
gaggatccggtgcgcatgctgcgcgtggtgcgcttcgccgccaagctcgacttcgacatc
gacgagacgacgcgcgcgccgatcgagaagatggccgatctgatcaataacgtacccgct
gcccgtctgttcgacgaaatgctgaagctgatgctgtcgggccacgcgctcgcgtgcctg
aagcggctgcgccaggaaggcctgcatcatgggctgctgccgctgctcgacgtggtgctc
gaacagccgaccggcgaaaaattcatttcgctggcactctccaacaccgacgcacgcgtg
ctcgccggcaagccggtttcgccaggcttcctgttcgcgacgctgttgtggcacgacgtg
cagcaacgctggcagaagttcgaggccgaaggcgagtatccggtgcccgcgctgcatcgc
gcgatggacgaagtgctcgacatgcagaccgaaaagctggcgatccacaagcgcttctcg
gccgacatgcgcgagatctggggcttgcaactgcgcctcgagaaacgctcgggccgcacc
gcgctgaagctgctcgaacaccaaagatttagagcggggtatgatttcctcctgttgcgc
tgcgcatcgggcgaactcgacgagtcggtcggtgcgtggtggacggagttcatcgaagga
gacgccgccgcgcgcgagacattgctcacgcagggcgggaaggaccggagccctagaaag
cgacggcggcgcggtggcgccagaaaccgcaaaccaggtgacggagtggagggcggctcg
tccgccgaacgcacggacaacgacgcgggcctcgaaggctcgcacgaagactga
DBGET
integrated database retrieval system
