Paraburkholderia sprentiae: BJG93_12210
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Entry
BJG93_12210 CDS
T04610
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pspw
Paraburkholderia sprentiae
Pathway
pspw00300
Lysine biosynthesis
pspw00470
D-Amino acid metabolism
pspw01100
Metabolic pathways
pspw01110
Biosynthesis of secondary metabolites
pspw01120
Microbial metabolism in diverse environments
pspw01230
Biosynthesis of amino acids
Module
pspw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pspw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BJG93_12210 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BJG93_12210 (dapF)
Enzymes [BR:
pspw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BJG93_12210 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CitF
Motif
Other DBs
NCBI-ProteinID:
APA87056
UniProt:
A0A1I9YL73
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All DBs
Position
1:complement(85633..86565)
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AA seq
310 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGYTEPVSLTTAQVRALANRHFGVGADQLLLVEKPTVEGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRERGLTDRRSVRVQVQKGTITLTMQDNGEVIVDM
GTPVFDPELVPFATKGLQGRRESADTLWPLDVNGTTRWMSVVSMGNPHAVQVVDDAEAFP
VLLEGPAIERHTRFPQRVNAGFMQIVNRNEIKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDSPVLVHTHGGDLTITWDSAQPGAPLLMAGPAATVFEGEIELAEEASSAAPQSRHAP
SNPAAVAPSV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctcaaattcaccaaaatgcacggcgcgggtaatgacttcgtcgtgctcgacggc
tataccgaaccggtcagcctgaccacggcccaggttcgcgcgctcgcgaaccgccatttc
ggcgtcggcgccgaccagttgctgctggtcgaaaagccgaccgtcgagggcgtcgatttc
agatatcgcattttcaattgcgacggcggcgaggtcgagcactgcggcaatggcgcgcgc
tgcttcgtcaagttcgtgcgcgagcgcggcctcaccgaccggcgcagcgtgcgcgtgcaa
gtccagaaaggcacgatcacgctgaccatgcaggacaacggtgaagtcatcgtcgacatg
ggcacccccgttttcgatcccgagctcgtccccttcgcgaccaagggcctgcaaggccgc
cgcgaaagcgcggacacgctctggccgctcgacgtgaacggcacgacgcgctggatgtcg
gtcgtgtcgatgggcaatccgcacgcggtgcaggtcgtcgacgacgccgaggcgttcccg
gtgctgctcgaaggtccggccatcgagcggcacacgcgcttcccgcagcgggtcaacgcg
ggcttcatgcaaatcgtcaaccgcaacgagatcaagctgcgcgtctacgaacgcggcgcg
ggcgaaacgctcgcatgcggcaccggcgcatgcgcggcggtcgcggccggtatccggcgc
gggctgctggattcgccggtgctcgtacacacccacggcggcgatctgaccatcacgtgg
gatagcgcgcagccaggcgcgccgctgctgatggccggccctgcggccaccgtcttcgaa
ggagagatcgagttggccgaagaggcgtcgagcgcggccccacagtcgcggcacgctccg
tccaacccggccgccgtggcgccctccgtctaa
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