Paraburkholderia sprentiae: BJG93_13985
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Entry
BJG93_13985 CDS
T04610
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pspw
Paraburkholderia sprentiae
Pathway
pspw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pspw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJG93_13985 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspw03019
]
BJG93_13985 (recQ)
03400 DNA repair and recombination proteins [BR:
pspw03400
]
BJG93_13985 (recQ)
Enzymes [BR:
pspw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJG93_13985 (recQ)
Messenger RNA biogenesis [BR:
pspw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BJG93_13985 (recQ)
DNA repair and recombination proteins [BR:
pspw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BJG93_13985 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
HRDC
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
APA86380
UniProt:
A0A1I9YJ97
LinkDB
All DBs
Position
1:complement(3339724..3341571)
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AA seq
615 aa
AA seq
DB search
MSRPLEILNEVFGYPAFRGQQGEIVEHVADGGDCLVLMPTGGGKSLCYQIPSLVRRERGF
GTGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSSAEAMAIERALRDGDLDLLYVAPER
LMTPRFQELLERSRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPRIALTATAD
AITRDEIIHRLALEDARVFVSSFDRPNIRYRIAEKDNARTQLLDFIRAEHTRADGTTDAG
VVYCLSRRKVEETAEWLKEKGVRALPYHAGMEFEVRQKHQEMFQREEGVVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSNAWMAYGLGDVVQQRKMIDESEADD
AHKRVQTGKLDALLGLCETATCRRVRLLAYFGETSQPCGNCDNCIEPPPTWDATREAQMA
LSCVFRAQRASGFHFGAGHLIDILRGNRSEKILQRGHDKLTTFGIGAALGEPEWRAAFRQ
LVAFGYLTVDHEGFGSLVLTEASKPVLRGEQKVTMRRYVKPTRTRQSSGRTSERADPTIG
MGPRERARWERLRMWRTETAKSDGVPAYVIFHDATLAEIARLGPASIDALRGVPGIGARK
LDRFGYELLHVVAAD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccgctcgaaatcctcaacgaagtctttggttatcctgcgttcagaggacag
cagggcgaaattgtcgagcacgtcgccgacggcggcgattgcctcgtgctgatgccgacg
ggcggcgggaaatcgctgtgctatcagattccttcgctggtgcggcgcgaacgcggcttc
ggcacgggtatcgtggtgtcgccgctgatcgcgctgatgcaagatcaggtggccgcgctg
accgaagtcggcgtgcgagccgcgtacctgaactcgacgctgtcgagcgcggaagcgatg
gccatcgaacgggcgctgcgcgacggcgacctcgacctgctgtacgtcgcgccggagcgg
ctgatgacgccgcgcttccaggaactgctcgagcgctcgcgcatcggtcttttcgctatc
gacgaagcgcattgcgtgtcgcaatgggggcacgatttccggcccgaatatatccagctg
tcggtgctgcatgagcgctttccgaatgtgccgcgcatcgcgctgacggccaccgccgac
gcaatcacgcgcgacgaaatcattcatcgtctggcacttgaggatgcgcgcgtgttcgtg
tcgagtttcgatcggccgaacatccgctatcgcatcgccgaaaaggacaatgcgcgcacg
cagctgctcgatttcattcgcgccgagcatacgagagccgacggcacgaccgacgcgggc
gtcgtctattgcctgtcgcgccgcaaggtcgaggaaactgcggaatggctgaaggaaaag
ggcgtgcgtgcgctgccataccacgccggcatggaattcgaggtgcgccagaagcatcag
gagatgtttcagcgcgaggaaggcgtcgtgatgtgcgcgacgattgcgttcggcatgggc
atcgacaaacccgacgtgcggttcgtcgcgcatctggatttgccgaagagcgtcgaaggc
tattaccaggagaccggccgagcgggccgcgatggattgccgtcgaacgcgtggatggcc
tacgggctcggcgatgtcgtgcagcagcgcaagatgatcgacgaatccgaagccgacgac
gcgcacaagcgcgtgcagaccggcaaacttgacgcgctgctcggtttgtgcgaaacggcg
acctgccggcgcgtgcgcctgctagcgtacttcggcgaaacgagccagccgtgcggcaac
tgcgataactgtatcgagccgccgccgacctgggacgcgacgcgcgaggctcagatggcg
ctgtcgtgcgtgtttcgcgcgcagcgggccagtggcttccacttcggcgccgggcatcta
atcgatattttgcgcggcaaccgcagtgagaaaattctgcaacgcggccacgacaagctg
accacgttcggtatcggcgcggcactcggcgaacctgaatggcgcgcggcgttccgccag
cttgtcgcgttcgggtatctgacggttgaccacgaaggcttcggttcgctggtgctaacc
gaggcgagcaagccggtgcttaggggcgagcagaaggtgacgatgcgccgctacgtaaag
ccgactcgcacccgtcaatcgtcggggcgcacgagcgagcgcgccgatccgacgatcggc
atgggacctcgcgagcgcgcgcgctgggagcgcctacgcatgtggcgcacagaaaccgcg
aagagcgacggtgtaccggcatacgtgattttccatgacgcgacgctcgcggaaatcgcc
cgtctcggccccgcttcgatcgatgctctgcgcggtgtcccggggatcggtgcgcgtaag
ctcgaccgattcggctacgaattgctgcacgtcgtagcggcagactga
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