Paraburkholderia sprentiae: BJG93_14200
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Entry
BJG93_14200 CDS
T04610
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pspw
Paraburkholderia sprentiae
Pathway
pspw00300
Lysine biosynthesis
pspw00470
D-Amino acid metabolism
pspw01100
Metabolic pathways
pspw01110
Biosynthesis of secondary metabolites
pspw01120
Microbial metabolism in diverse environments
pspw01230
Biosynthesis of amino acids
Module
pspw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pspw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BJG93_14200 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BJG93_14200 (lysA)
Enzymes [BR:
pspw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BJG93_14200 (lysA)
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
APA86418
UniProt:
A0A1I9YJD5
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All DBs
Position
1:3308012..3309274
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AA seq
420 aa
AA seq
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MTRSAFDYVDGVLHVEGVSAVSLAEQFGTPLYVYSRAALSAAWNAYAGACAGRRASVHVA
VKANSNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKQANEMREALAAG
VKCFNVESIPELDRLNAVAGEMGKKAPVSLRVNPDVDAKTHPYISTGLKTNKFGVAFEDA
RATYQAAAAMANLEVVGVDCHIGSQITEVAPYLDAIDKMLELVERIEQDGVTIRHIDVGG
GLGISYDDETPPEIGEFVRMVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRLEFLKPG
EDKNFAIVDAAMNDLARPAMYDAYHAIEPVVKRAVPAHVYDVVGPVCESGDWLGRERLLA
VEPGDLLAIRSAGAYGFVMSSNYNTRARAAEVMVDGTQAHVVRAREQVKQLFAGETILPA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactcgatcagcatttgactacgtcgacggcgtattgcacgtcgaaggcgtgtccgcc
gtttccctcgccgagcagttcggcacgccgctgtacgtctattcgcgcgccgcgctgagc
gctgcgtggaacgcctatgccggcgcctgcgccggacgtcgcgcgagcgtgcacgtggcc
gtcaaggccaacagcaacctcgcggtgctgaacgtgttcgcgcgcctcggcgcgggcttc
gacatcgtgtcgggcggcgagctcgcgcgcgtgctcgcggccggcggtaaagccgaaaac
actgtgttttcgggcgtcggcaagcaggcgaacgaaatgcgcgaggcgctcgcggccggt
gtcaaatgcttcaacgtggaatcgattcccgagctcgaccggctcaatgcggtggcgggc
gagatgggcaagaaggcgccggtgtcgcttcgtgtgaatcccgacgtcgacgcgaaaacg
catccgtacatttccaccggcctgaagacgaacaagttcggcgtcgcgttcgaagatgcg
cgcgccacctaccaggcggcggcagcgatggcgaatctcgaggtggtcggcgtcgactgc
catatcggctcgcagatcaccgaagtcgcgccctatctcgacgcgatcgacaagatgctg
gaactcgtcgagcggatcgagcaggacggcgtgacgattcgccatatcgatgtcggtggc
ggtctcggcatcagctacgacgacgaaacgccgccggaaatcggcgagttcgtgcgcatg
gtgctcgatcgcatcgaagcgcgcggtcacggtcaccgcgaagtctatttcgagccgggc
cgctcgctggtcggcaatgcgggcgtgctgctcacacgtctcgagttcctcaagccgggt
gaggacaagaattttgcgatcgtcgacgcggcgatgaacgatctcgcgcgccccgcgatg
tacgacgcgtatcacgcaatcgagccggtcgtgaagcgcgctgtgcccgcgcacgtgtac
gacgtggtcggcccggtctgcgaaagcggcgactggctcgggcgcgaacggctgctcgcg
gtcgaacccggcgatctgctcgcgatccgctcggccggcgcgtacggcttcgtgatgagc
tcgaactacaacacgcgtgcgcgcgccgccgaggtgatggtggatggtacacaggcgcat
gtggttcgcgcgcgcgaacaggtcaagcagctgtttgcgggtgaaacgattctgccggcg
taa
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