Paraburkholderia sprentiae: BJG93_15255
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Entry
BJG93_15255 CDS
T04610
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pspw
Paraburkholderia sprentiae
Brite
KEGG Orthology (KO) [BR:
pspw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspw03016
]
BJG93_15255
Enzymes [BR:
pspw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BJG93_15255
Transfer RNA biogenesis [BR:
pspw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BJG93_15255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
APA86601
UniProt:
A0A1I9YJW8
LinkDB
All DBs
Position
1:complement(3088654..3090786)
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AA seq
710 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPTAAELMQQADAL
AQEIDLDFLWECAPDDEFPFATLGAEYFGASFGATERAALVLRMHGSPVYFRRKGRGMYQ
RAPQEQLKMALAGLERKRQQALVQAQYEEELKAGRLPEAFAGGKALALLTKPDKNTIEYK
ALEGAAAARGISQARLMLECGAIASPRALHEAKFLSEFFPHGTGFPPVAAANVPDDLPQA
AIEAFSIDDVTTTEIDDAFSVEHLADGRVRIGVHIAAPALGIERGDEVDAIARARLSTVY
MPGDKITMLPDSVVETFTLAEGGYRPALSLYVIVNRDTQEIVASETRAERVFVKNNLRHN
TLDGIVTEEALAEGTGEYPHKDDIAVLWPFAQALFEKRQTARAGYGLRREVQRNSDFNFY
VDGEHITITPRRRGSPLDTIVAELAILANSSWGAFLHDHGVPGIYRTQRAFGAPSGPKRT
RMQTNAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLIACVQHGVTAKLAAPFKPKDADLF
AVVQGFDDTYTAYADYQRRMEYFWCLRWLTQENRKQVVASVVKGDLVRLEEIPLLLHVPG
LGVHARGTRLQMEVMSIDELTIEASVRLLHVLDAPTVTSGAEAEEGEDEGDEALLDASDD
SAESEAEAQAEADGSHPNDTPSAEESAPSGDGNDAANPADNDQHITEPGR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggtagtttcaaggccggcagcgtgctgtcgcgtcag
ggcgacgcgtttcaggtcgagttgccgggcggccggcgcgcgaaggtgcgcgcgaaggat
gtgctgatcgagttcgacaagcccaccgcggccgaactgatgcagcaggccgacgcattg
gcgcaagagatcgatctcgacttcctgtgggagtgcgcgccggacgatgaattcccattc
gcgacgctgggcgccgagtacttcggcgcgagcttcggcgcgaccgagcgtgcggcgctg
gtgctgcgcatgcacggctcgccggtgtacttccgccgcaagggccgcggcatgtaccag
cgcgcgccgcaagagcagctgaagatggcgctcgcgggcctcgagcgcaagcgtcagcag
gcgctcgtgcaggcgcagtacgaggaagagctgaaggcaggccgtctgccggaagcgttc
gccggcggcaaggccctcgcgctgctgacgaagcccgacaagaacaccatcgaatacaag
gcgctcgagggcgccgcggccgcgcgcggcatctcgcaggcgcggctgatgctcgaatgc
ggcgcgatcgcgtcgccgcgcgcgctgcacgaggcgaaattcctctcggagttcttcccg
cacggcaccggcttcccgcccgtcgcggccgcgaacgtgcccgacgatttgccgcaggcc
gccatcgaagcattctcgatcgacgacgtcaccacgaccgaaatcgacgacgcgttctcg
gtcgagcacctggccgacggccgcgtgcgtatcggcgtgcacatcgccgcgccggcgctc
ggcatcgagcgcggcgacgaggtcgatgcaatcgcgcgcgcgcgtttgtcgacggtctat
atgcccggcgacaagatcacgatgttgcccgacagcgtcgtcgaaaccttcacgctcgcc
gaaggcgggtatcgaccggcgctgtcgctgtacgtgatcgtcaatcgcgacacgcaggag
atcgtcgcgagcgaaacgcgcgccgagcgcgtgttcgtgaagaacaacctgcgccacaac
acgctcgacggaatcgtcaccgaagaagcgcttgccgaaggcaccggcgagtatccgcac
aaggacgatatcgccgtgctgtggccgttcgcgcaggcgctgttcgaaaagcgccagacc
gcgcgcgccggctacggcctgcgccgcgaagtgcagcgcaattccgacttcaatttctac
gtcgacggcgagcacatcacgatcacgccgcgccggcgcggctcgccgctcgacacgatc
gtcgcggaactggcgattctcgcgaactcgtcgtggggcgcgttcctgcacgaccacggc
gtgccgggcatctatcgcacgcagcgcgcgttcggcgcgccgagcggcccgaagcgcacg
cgcatgcagaccaacgccgcgccgcacgaagggctcggcgttccgcagtacgcgtggagc
acgtcgccgctgcgtcgctacgtcgacctcgtgaatcagtggcaactgatcgcgtgcgtg
cagcatggcgtgaccgccaagctcgccgcgccgttcaagccgaaggacgccgatctgttc
gcggtcgtgcaaggcttcgacgacacctacaccgcatacgccgactaccagcgtcgcatg
gagtacttctggtgtctgcgctggctcacgcaggaaaaccgcaagcaggtggtcgcgtcg
gtggtgaagggcgatctggtgcgtctcgaggaaattccattgctgctgcacgtgcccggc
ctcggcgtgcacgcgcgcggcacgcgtttgcagatggaagtgatgtcgatcgatgagctg
acgatcgaagcctcggtgcgtctgttgcacgtactcgatgcgccgaccgtgacgagcggc
gccgaagccgaagaaggcgaggacgagggcgacgaagcgctgctcgacgcatcggatgac
agcgccgaaagcgaagcggaagcccaagccgaagccgacggctcccatcccaacgacacc
cccagcgctgaagaatccgcgccgagcggcgacggcaacgacgccgcgaaccccgccgac
aacgaccaacacatcacggagccgggacgatga
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