Paraburkholderia sprentiae: BJG93_26050
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Entry
BJG93_26050 CDS
T04610
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pspw
Paraburkholderia sprentiae
Brite
KEGG Orthology (KO) [BR:
pspw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspw03032
]
BJG93_26050
03400 DNA repair and recombination proteins [BR:
pspw03400
]
BJG93_26050
Enzymes [BR:
pspw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BJG93_26050
DNA replication proteins [BR:
pspw03032
]
Prokaryotic type
DNA Topoisomerases
BJG93_26050
DNA repair and recombination proteins [BR:
pspw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BJG93_26050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
APA88764
UniProt:
A0A1I9YRE7
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All DBs
Position
2:complement(1018921..1020228)
Genome browser
AA seq
435 aa
AA seq
DB search
MATATRSTTASRSPTAANGNTASHAMPPGLHHADDSRPGYTRKRDRNGFVYFDVNGERII
DENEIQRINSLAIPPAYENVWICPDPRGHLQATGRDARGRKQYRYHPRWRETRDADKYER
MAEFGRALPKIRARVARDLKLPGMPLDKVVAAIVQLLDTTLIRVGSVEYARDNQSYGLTT
LRKKHVKIKAGQLRFQFRGKSGIEHDVTVGDPNIKRIVRRCAELPGHDLFQYLDEDGTRH
TVGSTDINDYLRRVSGADFTAKDYRTWAGSVFALAALRRLICGSVAEARHHIVATVKEVA
TLLRNTPAVCRRCYIHPAIISAFEADELQSLAPGQSRRGLKADELAFAVLLAQAEKQAAK
LARASGAKGRKTRESAVDESINGSLTSLLKKSRVVRKKTAGAAPTRAGEDLRAPARARTP
RTAQEMASELKPPTQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgcaactcgttcaaccaccgcatcacgcagcccgacggcagcgaatggcaac
accgcctcgcacgccatgccgccgggtctgcaccacgccgacgacagcaggcccggctac
acccgcaagcgcgacaggaacggctttgtgtatttcgacgtgaacggcgagcgcatcatc
gacgagaacgagattcaacgcatcaactcgctcgcgattccgcccgcttatgagaacgtg
tggatttgccccgatccgcgaggtcatctgcaggcgaccggccgcgacgcgcgtggccgc
aagcagtatcgctatcacccgcgctggcgcgaaacgcgcgacgccgacaagtacgaacgg
atggccgagttcggccgggcgttgccgaaaatccgcgcgcgcgtcgcgcgtgatctgaag
ttgcctggcatgccgctcgacaaggtggtcgcggccatcgtgcaattgctcgatacgacg
ctgatccgcgtcggcagcgtcgaatacgcgcgcgataatcagtcatacggattgaccacg
ctgcgcaagaagcacgtgaagatcaaggccggtcagttgcgcttccagtttcgcggcaag
agcggcatcgagcacgacgtgacggtgggcgatccgaacatcaagcgcatcgtgcggcgt
tgcgcggagctgccgggtcacgatctgttccagtatctcgacgaagacggcacgcgccac
accgtcggctcgaccgacatcaacgactacctgcgccgcgtgagcggggcggacttcacc
gccaaggactatcgcacgtgggcgggcagcgtcttcgcgcttgcggcattgcgccggttg
atctgcggcagcgtggccgaagcgcgccatcatatcgttgcgaccgtgaaagaagtggcg
acgctgctacgcaacacacccgccgtctgccggcgctgctatatccacccggcgatcatc
agcgcgttcgaagccgatgagttgcaaagcctcgcgccggggcaatcgcgccgcggactc
aaagccgatgagctagccttcgcggtcctcctcgcgcaagcggaaaaacaagcggcgaaa
ctcgcgcgcgcttccggcgcgaaaggccgcaagacgcgggagtcggcggtcgacgagagc
atcaacggttcgctgacgagtttgctgaaaaagtcgcgcgtggtgcgtaagaaaaccgcc
ggcgcggcaccgacacgcgccggggaagatctgcgcgctcccgcgcgcgcgcgtacgccg
cgcactgcgcaggaaatggcatccgaactgaaaccgccgactcagtga
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