Paraburkholderia sprentiae: BJG93_26135
Help
Entry
BJG93_26135 CDS
T04610
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pspw
Paraburkholderia sprentiae
Pathway
pspw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pspw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BJG93_26135
09124 Replication and repair
03420 Nucleotide excision repair
BJG93_26135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspw03021
]
BJG93_26135
03036 Chromosome and associated proteins [BR:
pspw03036
]
BJG93_26135
03400 DNA repair and recombination proteins [BR:
pspw03400
]
BJG93_26135
Enzymes [BR:
pspw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BJG93_26135
Transcription machinery [BR:
pspw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BJG93_26135
Chromosome and associated proteins [BR:
pspw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BJG93_26135
DNA repair and recombination proteins [BR:
pspw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BJG93_26135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Motif
Other DBs
NCBI-ProteinID:
APA88780
UniProt:
A0A1I9YRG3
LinkDB
All DBs
Position
2:1036251..1038512
Genome browser
AA seq
753 aa
AA seq
DB search
MSYVVAVRAMCEFTARRGDLDLRFTPAPTSIEGIAGHQMVAGRRASSYETEVALTGTHRS
LTVRGRADGYDPIANRLEEVKTYRGDLTRMPANHRVLHWAQALVYGHLLCRARGLAELTV
ALVYFDIGSQKETVLTQQHGARELETFFVEQCERFLDWAVQEDAHRVARNAALVTLQFPY
GRFRCGQRELAVAVYRAARDGKQLMAQAPTGIGKTLATIFPLLKACGEDRLDRVFFLTAK
TPGRALALDAIDSLHQPAPLPLRTLELVARDKACEHPDKACNGESCPLARGFYDRLDAAR
AAALARPRLDRAAVREAALAHGICPYYLAQELARWADVIVGDYNYYYDASAMLHALTQIN
QWRVGVLVDEAHNLLERARRMYTASLDQSAFRLVRKNAPAALKKPLERLQREWNAVKRAQ
TASYQVHAQVPGKLLAAAQNLISAVTDQLADAPLSIDEHALRVFFDAMHFVALAEQFGEH
SMFDVTLSAERYAPRDPTSALLCVRNVIPAPFLAPRYAAARTTVMFSGTLNPQHFYRDTL
GLADDTQWLDVEGPFRAEQLQVHVAAHVSTRWRDRERSLAPIVELIAKQYDAQPGNYLGF
LSSFDYLQRVVALLRERHPALPVWAQEPGMDEAARDAFLARFRTMNQGIGFAVLGGAFSE
GVDLTGQQLIGAFVATLGLPQVNEVNEQMRRALDARFGHGYDYMYLYPGLQKVVQAAGRV
IRTEEDRGVVHLIDDRFRRPEVRRLLPRWWQIG
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagttacgtcgtggccgttcgcgcgatgtgcgaattcaccgcgcggcgcggcgatctc
gatctgcgcttcacgcccgcgccgacttcgatcgagggcatcgcgggccatcagatggtt
gccggccgtcgcgcgagcagctacgaaaccgaagttgcgttgacgggcacgcatcgcagc
ttgacggtgcggggtcgcgcagacggctacgatcccatcgcgaaccggctcgaagaagtg
aagacgtaccgcggcgatctcacgcgcatgcctgccaatcatcgcgtgctgcattgggcg
caggcgctcgtgtatgggcatctgctgtgtcgggcgcgcgggctcgccgagttgacggtc
gcgctcgtgtacttcgatatcggcagtcagaaggaaaccgtgctcacgcagcagcacggc
gcacgcgaactggaaaccttcttcgtcgagcagtgtgagcgatttctcgattgggccgtg
caggaagacgcccatcgcgtcgcgcgcaatgcggcgctcgtcacgttgcagtttccctat
gggcggtttcgctgcgggcagcgcgaacttgcggtggccgtgtatcgcgcggcacgcgac
ggcaaacagttgatggcgcaggcgccgaccggcatcggtaagacgctggcgacgattttt
ccgttgctgaaggcttgcggcgaagaccggctcgaccgggtgttcttcctgaccgcgaag
acgccgggccgcgcgcttgcgctcgatgcgatcgactcgctgcaccagccggcgccgttg
ccgctcagaacgctcgaactcgtcgcgcgcgacaaagcctgcgagcatccggataaagcc
tgcaacggcgagtcctgtccgctcgcgcgcggcttttacgatcgtctcgatgcggcgcgt
gccgccgcgctggcgaggccgcggctcgatcgcgcggcggtgcgcgaggcggcgcttgcg
cacgggatctgcccgtactatctggcgcaggagctcgcgcgctgggccgatgtgatcgtc
ggcgattacaactactactacgacgcaagcgcgatgctgcatgcgctcacgcagatcaac
cagtggcgcgtcggcgtgctggtcgacgaagcgcacaacttgctcgaacgcgcacggcgc
atgtataccgcctcgctcgatcaaagcgcgttccggctcgtgcgcaagaatgcgccggcg
gcgctaaagaagccgctcgaacgcttgcagcgcgagtggaacgcggtgaagcgcgcacag
acggccagctatcaggtgcatgcgcaggtgcccggcaaactgctggccgccgcgcagaat
ctgatcagcgcggtgacggatcagctcgccgatgcgccgttgtcgatcgacgaacacgcg
ctgcgcgttttcttcgacgcgatgcacttcgtcgcgctcgccgagcagttcggcgagcac
tcgatgttcgacgtgacattgagcgccgagcgctacgcgccgcgcgacccaaccagcgca
ttactgtgcgtgcgcaacgtgatccccgcgccgttcctcgcgccgcgctatgcggccgcg
cgtaccacggtgatgttctccggcacgctgaatccgcagcatttctatcgcgacaccctg
gggctcgccgacgacacgcaatggctcgacgtcgaaggaccgtttcgcgcggagcaattg
caggtgcacgtggccgctcatgtgtcgacgcgctggcgcgaccgcgagcgctcgctcgcg
ccgatcgtcgagctgatcgcgaagcagtacgacgcgcagcccggcaactacctgggcttc
ctgagcagtttcgactatctgcaacgcgtggtcgcgctgctgcgcgagcggcatcccgcc
ttgccggtgtgggcgcaggagccgggcatggacgaagcggcgcgcgacgcgtttctcgcg
cgcttcaggacgatgaatcagggtatcggcttcgcggtgctcggcggcgcgttttcggaa
ggcgtcgatctgaccggtcagcaactgatcggcgcgttcgtcgcgacacttggtctgccg
caggtcaacgaggtcaacgagcagatgcgccgcgcgctcgacgcgcgcttcggccatggc
tacgactacatgtacctgtatccgggtttgcagaaggtggtgcaggcggcggggcgcgta
atccgcaccgaagaagatcgcggcgtcgtgcatctgatcgacgaccgctttcgcaggccg
gaagtgcgtcgcctgttgccgcgctggtggcagatcggctag
DBGET
integrated database retrieval system
