Paraburkholderia sprentiae: BJG93_34875
Help
Entry
BJG93_34875 CDS
T04610
Name
(GenBank) DEAD/DEAH box helicase family protein
Organism
pspw
Paraburkholderia sprentiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KfrB
Eco57I
ResIII
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
APA90298
LinkDB
All DBs
Position
pl3WSM5005:43848..50033
Genome browser
AA seq
2061 aa
AA seq
DB search
MKRRADEAQLGFDFTFNETVAAIERINEDAAADPIDEQTGAKNAGRPTQTTGRGQARPPT
GYDLFSAPEPVSSARVDDPRPLGAELAAATEGAGNAGRSDLAGPSAGPADGGARGVDGRV
GDVANGSVGVGSPGAGEHLDRTELEQTAQPALARAPIDIEPPTDYVISDADRLGEGGAKT
KYRENVAALRLLAKLRDEDRAASREEQSVLVRYVGWGGIPQAFDHRNTEWRTEFEELASL
LGKDDYEAARRSTQDAHYTAQPVVEAVHSAMVRFGFDGGRVLEPSIGSGNFVGLMPASMR
ERSKVTGIELDHVTAQIARHLYPSASVINKGFQEVTIPGGYFDAAIGNPPFGNQSVYDAN
HRDISQFSIHNYFISKSVDKLREGGVAAFVVSNYFLDARDSSARSHIADQAHFLGAIRLP
NTAFKKNALTEVTTDIVFLQKAKAGEVPERNWVDVVDVPDLAGGEDMPLNQYYLDRPEMM
LGRMERAGTMYAGGTPALIAPEGQDLAVDLATAIMRLPEGIYVGREAERTIAEAAQEPIE
VPESVKIGAYFVTEKGKVAQRLDDLLDEPQARLVTDKNEKGLERIKGMTDIRNVLRDLMR
AERREDVPEADLAMLRGKLNVVYDAFVKRNGHVNSLVNRQAMSEDPDYPLLQSLERDYDK
GISKEVAKKNGVEPRDPSAQKAAIFNTRVMSPRREVTHVESAKDALVVSMNETGGVDLDL
MVRLSGRDEDAILRELQGLVYLNPASQRWETADRYLTGNVKDKLKLAEVAALADNRYAGN
VEALKIVQPPDIEAVDISIQLGSTWVPDPVVNDFVTHIFGNVHRNVTYQPSLGKWIANIG
TGDATTMRVTWGTEDAPANKLLESVLTNKAIEVQDIVGYDEYRNPIRKTNEAKTAAANQK
ADEIRQAFSDWVWEDKDRREMLGRLYNDRFNTNVAPRYDGSHLSLPGASSAIELRPHQKD
AIWRGIQDGTELFDHVVGAGKTFACIATAMESKRMGLTKKALFVVPNHLLLQWKDDIYKL
YPDANVLIAEKSDFQKENRERLFARIATGDWDAVVVGHSSFKKIGMPPQMLNEILNEQID
DLTDAILSIKEERGDRVTIKEMEKARDRMKAKLERAAETGAKDRVVTFDELGIDAMFVDE
ADEFKNLFITTSLSRISGLGNLQGSDKAFDLFVKARYLQKQNGGRGVYFATGTPVANTIA
EIYTMQRYMQYDELKTRGIHHFDAWASTFGQVVTGWELDATGVNYRLNSRFSKFQNVPEL
TNLYRSFADVITREDLQRQAAERGTRFPVPKVKGGKPTNIVVERSPMQARYMGEQTPVLG
SDGKPIRRADGSTVTNWTEGSIIHRMENLPKDPSEDNPLKITNDARKAGLDYRLIDPDAP
DFEGSKTNVAIDEMVRIYHAWDDKRGTQLVFCDLSTPKLDRNAANNQVAAVARDNAADEH
DAPGGDEVAVSMDELLSRGNGKFSVYDDIRSKLIARGIPADEIRYIHEAKTDLQRAKLFE
QVRRGDVRFLLGSTAKMGAGTNVQTRLVAEHHLDAPWRPRDLEQREGRIVRQGNELYKED
PDGFEVEILRYATKQTYDSRMWQTIEYKAGAIEQFRRGDGISRVIEDVAGEAANAAEMKA
AATGNPLIFMQVQLSADLKKMEALHSNYKRNRHSLESSVDWLSKGDERAEKRIKAYESDA
ALRNANTTEEWQMKVGQNTFNADSKDHLMESVLSGMQRAIEGRAKSVSDKPTVVNIGKYR
GFVVTAAADSRHIQFALKGAEVYTPGNLRYSVEDKFSVTGFIQRMDNVLEDIEDKVYWEK
DQAERDRAELAKVKEQLGKPFAQQRELELLRKNNADVMVELRKMQDDPEYISTWEPATIE
SVPAQDGDLFASVDPLASERAARETAYRSEVRESIEKAAADYIAGMQEPHRSDEFFNRQH
DRLFEGDGAKDVHAGLIEKIKSDRELALAVVTAPGKRFASPEMLEAAESVVQIAAAAKQQ
ASAVGLTPEMPNRDGGTYSGRVVAQTPHYLVQDAGHGKGVLHHRGDVIQTNGVNIGDNIR
LSYKAGHALARANDANNSLTR
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacgtgccgatgaggcccaactcgggtttgactttacatttaatgagacggtt
gccgcgatcgagcgcatcaacgaagatgctgcggctgacccaatagacgaacagactgga
gctaaaaatgctggaaggccaactcaaaccactggacgtggccaagcgcgtcctccaacc
ggatacgatctcttcagtgcgccagagcccgtttcatctgcgcgcgtggacgatcctcga
ccgctgggcgctgaactcgccgcagcgactgaaggcgctggaaacgcagggcgaagtgat
cttgctgggccgtctgctggaccagcagacggcggagcacgaggcgttgatggacgcgtc
ggagatgttgcaaacgggagtgtcggagtcggaagtcctggcgctggcgaacatctcgac
cgaactgagctagaacagacagcacagccggctctcgcgcgcgcgccgatcgacattgaa
ccgccgaccgactacgtcatcagtgacgcggaccgactgggcgaaggcggcgcaaagacg
aagtatcgcgaaaacgtcgcggcacttcgcctgctggcaaagctgcgggacgaagaccgc
gccgcttcgcgggaagaacaatcggtactcgtgcgatacgtcggctggggcggcattccg
caggctttcgatcatcgcaataccgaatggcgcaccgagtttgaagagctggcctcactg
ctcggaaaagacgactacgaggctgcgcgtcgatcgacgcaggacgctcactatacggcg
cagccagtggtggaagctgtgcacagcgcaatggtgcgcttcggttttgatgggggccgt
gtcctcgaaccctcgattggcagcggtaacttcgttggcctcatgcctgcctcgatgcgc
gaacggtcgaaggtcacgggcatcgagcttgaccacgtcacggcgcaaatcgcgcgtcac
ctgtacccgtccgcttcggtcatcaacaaagggtttcaggaagtcaccattccgggtgga
tacttcgatgccgcgatcggcaatcctccgttcggcaatcagtcagtgtacgacgcgaac
catcgcgacatctcgcagttctcgattcacaactacttcatctcgaagtcagtcgacaag
ctgcgcgaaggcggcgttgctgcgtttgtcgtctcgaattacttccttgatgcacgcgac
tcgtccgctcggtcgcacattgccgaccaggctcacttcctcggcgcgatccgacttccc
aacacggcattcaaaaagaacgcgctgaccgaagttacgaccgacatcgtctttctccag
aaagcgaaggcgggcgaagtgcctgagcgcaactgggtcgatgtggtggacgttcctgac
cttgcaggcggcgaagatatgccgctgaatcagtattacctcgaccgtcctgaaatgatg
ctcggacggatggagcgcgccggcacgatgtacgcgggcggcacgcccgctctgattgcg
ccggaaggccaagacctcgcggtagacctggcgacggccatcatgcgcctgccggaaggc
atctacgtcggccgcgaggcagagcggaccattgctgaagctgcgcaggagccgatcgaa
gttcctgagtcggtcaagatcggcgcgtatttcgtcaccgaaaagggcaaggtcgcgcag
cgtctggacgatctgcttgacgaaccgcaagcgcggctcgtgacggacaagaacgaaaag
gggctggagcggatcaagggcatgacggatatccgaaatgtcctgcgcgacttgatgcgc
gccgaacggcgcgaggacgtgcccgaagcggatcttgcgatgctccgcggcaagctgaac
gtggtctacgacgctttcgttaagcgcaatggccacgtcaactcgctcgtcaaccggcag
gctatgagcgaagatcccgattacccgctgcttcaatcgctcgagcgcgactacgacaag
ggcatctcgaaggaagtcgcaaaaaagaatggcgtcgagccgcgcgacccgagcgcgcaa
aaggctgcaatcttcaatacgcgcgtcatgtccccgcgtcgcgaggtcacgcacgtagaa
agcgcgaaagacgctctggtcgtctcgatgaacgagacaggcggcgtcgatctggatttg
atggttcggttgtccggccgcgacgaggacgcaatcctccgcgagctgcaaggactcgtc
tatctgaacccggcatcgcaacggtgggaaacggccgaccgttacctgacgggcaatgtg
aaggacaagctgaaactggccgaagtcgcggcgttggctgataaccgttacgccggcaac
gtcgaagcactgaaaattgtccagccgccggatattgaagccgtcgacatctcgatccag
ctgggttcgacgtgggttcctgatccggtggtcaatgatttcgtgacccacatctttggt
aacgtccatcgcaatgtgacctaccagccgagcctcggcaagtggatcgcgaacatcggc
acgggcgacgcgaccacaatgcgcgtgacgtggggtacggaagacgcgccggccaacaag
ctgctcgaatcggtcctgaccaacaaggcgatcgaggtgcaggacatcgtcggctacgac
gaataccgcaatcccattcgaaaaacaaacgaagcgaagacggctgcggcaaatcagaag
gcggatgaaatccgccaggcgttctccgactgggtatgggaggacaaggaccggcgcgag
atgctggggcgactgtacaacgatcgtttcaacaccaacgtcgcgccgcgttacgacgga
tcgcacctgtcgcttccgggcgcgtcgagcgctatcgagcttcgtccgcatcagaaggat
gcaatctggcgcggcatccaggacggtaccgagctgttcgaccacgtggtgggggcgggt
aagacgttcgcatgtatcgcgacggcgatggaaagcaagcgcatgggcctgacgaaaaaa
gccctattcgtcgtgccgaaccatctcttgctgcaatggaaggatgacatttacaagctg
tatcccgatgcgaatgtgctgattgctgagaagtccgacttccagaaagaaaaccgggaa
cgtcttttcgcgcgcattgccacgggcgactgggacgcggttgtagtgggacattcgagc
ttcaaaaagatcggcatgccgccgcaaatgctcaatgaaatcctcaacgagcaaattgac
gatctgacggacgcgatcctttcaatcaaggaagagcgcggcgatcgcgtcaccatcaag
gagatggaaaaggctcgcgaccggatgaaggcgaagctcgaacgtgcagcagaaaccggc
gcgaaagatcgcgtcgttaccttcgatgaactgggtatcgacgccatgttcgtggacgag
gctgacgagtttaagaaccttttcatcacaacgtctctctcgcgaatttccggcctcggc
aaccttcaaggttccgacaaggctttcgatctgtttgtgaaagcgcgctacctccaaaag
cagaacggtggtcgtggcgtctatttcgcgaccggcacgcccgtggccaacaccatcgct
gaaatctacacgatgcagcgctacatgcagtacgacgagttgaagacgcgcggcattcac
cacttcgacgcgtgggctagcacattcgggcaagtcgtcacgggttgggagctggatgct
accggcgtgaactaccggctcaactcacgcttctcgaaattccagaacgtccccgaactg
accaatttgtatcgctcctttgctgatgtcatcacgcgcgaggatctgcaacggcaggca
gcagaacgcggtactcgcttcccggtgccgaaggtgaagggcggcaagccgacaaacatc
gtggtcgagcgctcgcccatgcaggcccggtacatgggggaacagacgcccgtgcttgga
agtgatggaaagccaatccgtcgtgcagacggctcgacagtcacgaactggacggagggt
tcgatcattcatcgcatggagaatttgccaaaagaccccagcgaggacaatccgctcaaa
atcacgaacgatgcgcgtaaggctggtctggactatcggttgatcgacccggacgccccc
gacttcgagggcagcaaaacgaacgtcgcgattgatgagatggttcgcatctatcacgcg
tgggatgacaagcgcgggactcagctggtgttttgcgacttgtctacgcccaagctcgat
cgcaacgcagcaaacaatcaagtcgcagcagtcgcgcgggataacgccgccgacgagcac
gatgctccgggcggcgacgaagttgcagtgtcaatggacgagcttctctctcgcggcaac
ggtaagttctcggtctacgacgacattcgctcgaagctcatagcgcgcggcattcccgct
gacgaaattcgatacattcacgaagcgaaaaccgatctgcaacgcgcgaagcttttcgaa
caagtgcgacgcggcgacgttcgcttcctgctgggctcgaccgcgaaaatgggcgctggt
acgaacgtgcagacccgcctagtagcggagcatcatctggacgcaccgtggcgcccgcgc
gatcttgaacagcgcgaaggccgcatcgtgcggcagggcaatgaactctacaaagaagac
ccggacggttttgaagtcgagattcttcgctatgcgaccaagcagacctacgattcgcgt
atgtggcaaaccatcgaatacaaggcgggcgcgatcgagcagttccggcgcggcgatggt
atctcgcgcgtgattgaggacgtggccggcgaagcagccaacgcggcagaaatgaaagcc
gcggcgacgggaaatccgctgatcttcatgcaggtgcagttgtcagccgacctgaaaaaa
atggaagcgctgcattcgaactataagcgcaatcgtcattctctcgaatcgagcgttgac
tggctttccaagggagacgagcgcgccgagaaacgcatcaaagcatatgagtctgacgcg
gcgctgcgtaacgccaatacgacggaagaatggcagatgaaggtggggcagaacacgttc
aacgccgactccaaggatcatctgatggaatcggtgctgagcggcatgcagcgcgccatt
gaagggcgcgcgaagtccgtgtctgataaaccgacggtcgtgaacatcggcaaatacaga
ggctttgtcgtgaccgctgcggccgacagccgacatattcagttcgccctgaaaggtgcc
gaggtgtacacgccgggcaacctgcgctattccgtcgaggacaagttcagcgtaacgggc
tttattcaacgcatggacaacgttctggaagatatcgaagacaaggtctattgggaaaag
gatcaggccgaacgcgatcgcgcggagttggccaaggtaaaggagcaactcggaaagccg
ttcgcgcagcaacgcgaactggaactgctccgcaaaaacaacgccgatgtgatggtcgag
ctccggaagatgcaggacgatcctgaatacatctcgacgtgggaacccgcgacgatcgaa
tctgtgccggcgcaagacggcgacctgttcgcgtccgtcgatccgctggcgtccgaacgc
gcggcgcgcgagacagcgtatcgctcggaagtgcgtgagtcgatcgagaaagctgcggcc
gactacatcgctggcatgcaggagccgcatcgttcggatgagttcttcaaccggcagcac
gaccgcctgtttgaaggtgacggtgccaaggacgttcacgctggcctcatcgaaaagatc
aagtccgatcgagaacttgcgttggcggtcgtaactgcgcctggcaagcggttcgcctcg
cccgaaatgctcgaagccgcagagtccgttgtgcagatcgcggcggcagccaaacaacag
gcaagcgcggtcggtcttacgcccgagatgccgaaccgcgacggtggcacgtattccggt
cgagtcgtggcgcagacccctcactaccttgttcaagacgctggccacggtaagggagtc
ttgcatcatcgcggcgacgtgatccagacgaacggggtgaacatcggcgacaacattcgg
ctcagctacaaggcaggacatgcgctggcccgcgcgaatgacgcaaataattcactgacc
cgatag
DBGET
integrated database retrieval system
