Punctularia strigosozonata: PUNSTDRAFT_100162
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Entry
PUNSTDRAFT_100162 CDS
T03131
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
psq
Punctularia strigosozonata
Pathway
psq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PUNSTDRAFT_100162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psq03041
]
PUNSTDRAFT_100162
Enzymes [BR:
psq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PUNSTDRAFT_100162
Spliceosome [BR:
psq03041
]
Complex A
U2 snRNP components
U2 related factors
PUNSTDRAFT_100162
Complex B
PUNSTDRAFT_100162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CP12
KH-I_KHDC4-BBP
SRP_SPB
Motif
Other DBs
NCBI-GeneID:
18875532
NCBI-ProteinID:
XP_007382062
JGI:
100162
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MPPRDEKSAQPNASTESNPEDDKMKAKKARLEAWKKEREAKKALDEAKAKAMALAGKSAP
PVNASATPAKPAGALNRNALNGLGLKGLPIKSDVLRSTSATMSMDDSNDTKRKLEKLGDM
PAVDMTMVDGEGAVGDLEGDEDDEEANRMEAVMKSKTKDAMDVDEDEVDPLDAFMTGIKE
EVKKVNEEDIKKAGAAPSQQSRVRLDDGTEDNVEDFAEGVQDELDQTELNPEDILALAAK
KAKKKDLATVDHSRVQYEPFRKEFYIAPPDIAAMTDEDAELVRLELDSIKIRGVDCPRPV
TKWSHFGLPASCLEVIKRLNFTAPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMF
RHIKDQRPLEQMEGPIGVIMTPTRELAVQIHRECKPFLKVLNLRAVCAYGGSPIKDQIAD
MKKGAEIIVCTPGRMIDLLTANSGRVTNLKRVTYIVLDEADRMFDMGFEPQVMKIINNIR
PDRQTVLFSATFPKQMDSLARKILRKPLEITVGGRSVVAAEIEQIVEVRPEDTKFTRLLE
ILGQMYNEDPECRTLIFVDRQEAADNLLRELLRRGYLCMSLHGGKEQVDRDQTIADFKSG
VVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITEEQE
RYSVDIYRALKASNAPVPAELEQLANGFLDKVKSGKAKAAGSGFGGKGLDKLDQERDARE
KAERKAYGESEEEKPAATEKADDPAKAAPAEDAMTFGNFKVEVKRGPAPDSSKGQLGVAG
AALAARRLVQQKEQERIEAALKTAEEAAARAGKDSPAHKQALSVVAKLNAQLRAHKLVAQ
SQLALLEKGGGEQKPSTADATEFHAIIPINDYPQKARWKVTNKETMVQLVDMTGASVTNK
GIYYEPGKEPPLEGPPKLHLLIESNEEFRVEQAVREIKRLLIEASAAALQAEMRNPTATH
GRYSVL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccagggatgagaagtctgctcaaccaaacgcttctacagagtcgaatcctgag
gatgacaaaatgaaggccaagaaagcccgtttggaagcttggaagaaagaacgagaggcg
aagaaagccttggacgaggcaaaggcgaaagccatggcattggcagggaagtcagcccct
cctgtgaacgcttctgccactccggcgaagcctgcaggtgccttgaatcgcaatgcgttg
aatggactgggtctcaagggtcttccaatcaagtccgacgtactcagaagtacctcggcc
accatgtcgatggatgactctaacgataccaaacgcaagttggaaaaacttggtgacatg
ccggctgtggatatgacgatggtcgatggcgaaggcgcagtcggtgatttggagggcgat
gaagatgacgaggaggcaaatcggatggaggctgtaatgaagtccaagactaaagacgct
atggatgtggatgaagacgaggtggacccactggatgcctttatgaccggtattaaagaa
gaagtcaagaaggtcaacgaagaggacattaagaaagcaggcgctgctcctagtcagcaa
tcgcgtgtccgacttgatgatggcacggaggacaacgtcgaggacttcgcggagggtgtg
caggatgaactcgatcagactgagttaaatcccgaggatattctcgccctcgccgcgaaa
aaagctaagaagaaggaccttgcaaccgtggatcattcccgcgtccagtatgaacctttc
cgcaaagaattctacattgcgcctcccgatatcgctgcaatgaccgacgaggatgccgaa
ctggttcgattggaattggatagtatcaaaatccgcggcgtcgattgccctcgacctgtg
acgaagtggagtcacttcggtctacctgctagctgtctcgaagttataaagaggctcaac
ttcacggcgccgacacctatccaagcacaagctatccctgctatcatgtccggccgagac
gtcattggtgtcgccaagacgggttcagggaagaccattgcctttctgttgccgatgttc
cggcacatcaaggatcagcgacctctcgagcagatggaaggtcctatcggtgtcatcatg
accccaacccgtgaacttgctgttcagatacaccgagagtgtaagcctttcctgaaggtt
ctcaacttacgtgctgtatgtgcttatggtggctccccgatcaaggaccaaatcgcagat
atgaagaagggggcggaaatcatagtctgtacccctggtcgcatgatcgacctccttacg
gcaaattcaggtcgagtgaccaacctcaaacgcgtcacgtatatcgttcttgacgaagct
gaccgtatgttcgacatgggtttcgagccccaggtcatgaagatcatcaacaacatacgc
cccgatcggcagactgtcctcttttctgccactttcccgaagcaaatggattcgctggcg
cgaaaaattttgcgcaaacccctcgagattaccgtcggtggtcgttccgtggttgcagcg
gagatcgagcagatcgtcgaggtccgtccagaagacacgaagttcacacgtctcctcgag
attctaggccagatgtacaacgaagatccggaatgcaggacgttgatcttcgtcgatcgc
caggaagccgctgataacctccttcgcgaactacttcgacgagggtacttatgcatgtct
ctccatggaggcaaggagcaagtagaccgtgatcagaccatcgctgatttcaaatctggc
gtggttcccatcgtcattgctacgtctgttgctgcacgaggcttggacgtgaaacaactc
aaacttgtcatcaactacgacgcgccgaaccatatggaggactacgtccaccgagctggc
cgaactggccgagccggcaataagggtacatgtgtgaccttcattacggaggaacaggaa
cggtattcagtagatatctacagggcgttgaaggctagcaacgctcctgttccggcagaa
cttgagcaattggccaatggtttcctcgacaaagtcaaatccggcaaagcgaaggctgcg
ggatctggtttcggaggtaaaggcttggataagcttgaccaagagcgtgatgcgagagag
aaggccgagcggaaggcgtatggcgagtccgaggaagagaagcccgccgcgacagagaag
gcggatgacccggcgaaggctgcgccagccgaggatgctatgactttcgggaacttcaaa
gtcgaggtcaaacgcggccctgctccagattcctcgaagggacaactcggtgtggccggc
gcagctctggccgcccgtcgactcgttcagcagaaagaacaggagcgtattgaagcggca
ctcaaaacagcagaagaagctgctgctcgtgcggggaaagacagtcccgcacacaagcaa
gcgctcagtgttgtcgccaagctcaatgcgcagctcagggcgcacaagctcgttgctcag
tcacaactggcccttctcgaaaagggcggaggagagcaaaaaccttcaaccgcagatgcg
acagagttccatgccatcataccgatcaacgactatccccagaaagctcgatggaaggtc
accaacaaggagacaatggttcagttggtcgatatgacgggcgcatcggtgacgaacaaa
ggtatatactacgagcccggcaaggagcccccactcgaaggacctccaaaattgcatctg
ctcatcgagtcaaacgaggaattcagggtcgagcaagcggtccgagagatcaaacggttg
cttattgaggcgtccgcagccgctctgcaggcagagatgcgcaatcctacagcgactcac
ggcaggtatagtgtgctgtag
DBGET
integrated database retrieval system
