Punctularia strigosozonata: PUNSTDRAFT_102438
Help
Entry
PUNSTDRAFT_102438 CDS
T03131
Name
(RefSeq) WD40 repeat-like protein
KO
K11293
protein HIRA/HIR1
Organism
psq
Punctularia strigosozonata
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psq03036
]
PUNSTDRAFT_102438
Chromosome and associated proteins [BR:
psq03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
PUNSTDRAFT_102438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
KNTC1_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
18875718
NCBI-ProteinID:
XP_007383613
JGI:
102438
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MRFTKPAWVAHRDTSSRDDQSSKRLSIFSVHVHPDNSRIATGGLDSKVRIWSTKPILNEA
SEQKGRIPKVLSTLAMHVGPVLTVRWAHSGRWLASGSDDATVVVWDLDPSAKGMVWGSNE
VNVEGWKPLKRLPGHESDVTDVAWSPGDRYLASVGLDSLVMIWCGFTLERLRKLDLHQGF
VKGVCWDPVGEFLATQSDDRTVKIWRTTDWQLEAEIRKPFEHSPGSTFFRRLSWSPDGAH
ITASNAVNAKGFVFIAAVIARTVWTSDISLVGHENTVEVAAYNPHVFLRNPAGEVSTSNI
CSVVALGADDRAVSVWQTKSARPIIVAKEVFERQIMDLAWSWDGLTLYAVSSDGTLAAFD
FDPEELEGIAPFDAQEQYLTKFKFVPPPLPEGYVHVPHPSSRYSVGEKNKTGPSPTKTSQ
PAAPRVITPQPETINKLVAKRKPKDFRRRQSGPFNPSSVPSAGMPSASISSAPVSQAPPP
QPLAPNGSVISESDSFGFGEASGTSTPLASTFSRAGRARQESLHTDPFRTTSSDLFDSSM
GGADMDVDGRGYASIAALDEKGKRAIEPDEGLGVGGKTSKPRTLGGDRPREAVRPKQLGM
AQPAQGSVVVAGGSGLGVNLPTPPLLTFLSVAVKVSGGGSTDAVLEGRNPENGGANEVLF
AQGKQTQWLDYLPSPVSILAASSHFCAVALVDGSVNIYSHTGRRLMPTLSLGSPCSYLDA
CEDSLMALTSSGQLYAWNVKQQRAVYSPVSILPILQPSACEVLSASVRANGSPVIQLSTG
VAHSYDPGLSTWIKLSDKWWMEGSDVWQGRGRGNNTGARGHGVVAAVEQSINELVRGAGV
LDNDAYNGAAAAGEKPRPEWWNAALTLGHLESKMSAAKVLDSPSEYKQVLLVYAQRIANE
GFRSKAEELVKELFGPVYWRPGKDESWCPTVLGISKRDLLKEVLNIFARSKTLTKLAIDW
QDLLKKAQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcacgaaaccagcctgggtcgcacatagagatacttcatctcgcgacgaccag
agctcgaagcgcctctccatcttctcggtgcatgtccacccggacaactcgcgtatcgcc
acaggcgggttggactccaaagtccggatatggagcacgaaaccgatcttgaacgaggcg
agcgagcagaaggggaggatcccgaaggtgttgagcacgttggcgatgcatgtgggaccg
gtgttgaccgtgcgatgggcacattcagggaggtggttggcgagcgggagcgacgatgcg
acggtcgtcgtttgggaccttgatccgagtgcgaaagggatggtgtggggctcgaacgag
gtgaatgtggaaggctggaaacctctcaaacgattgccggggcatgagagtgacgttacg
gacgttgcttggtcaccgggcgaccgatacctggcttctgtcggccttgactccttggtg
atgatatggtgcggtttcaccctcgagcgccttcgtaagctcgacctgcatcaaggattc
gtcaaaggtgtatgctgggatcccgttggcgagtttctcgcgacccaatccgacgatcgc
accgtcaagatatggcgcaccaccgactggcagctggaggctgagataaggaagccgttc
gagcattctcccggttcgactttcttcagacgactcagttggtcaccagacggcgcgcat
ataaccgcatcaaacgccgtgaacgcaaaaggcttcgtgtttatcgcggctgtgattgct
cgcacagtgtggacctcggacatcagtctcgtcgggcacgaaaataccgtcgaagttgct
gcatataaccctcacgtctttttgcggaacccggcgggtgaagtatcgacgtcgaacata
tgttccgttgttgctctgggcgcggacgatagagcggtgtcggtatggcagaccaagtca
gcaagaccgatcattgttgcaaaggaggttttcgagaggcagatcatggaccttgcttgg
tcttgggatggcctcacgctgtacgccgtctcctcggacggcacactggctgcattcgac
ttcgatccggaagagcttgagggtatcgcacccttcgatgcccaggagcagtacctcact
aaattcaagttcgtgcctccaccgctaccagagggatacgtgcacgtcccgcatccatcc
tcgcggtacagcgtcggggagaagaacaaaaccggaccgtcacctaccaaaaccagccag
cccgcggcaccgagagtaatcacaccccaaccggagacgatcaacaagttagtggcgaag
aggaaacccaaggacttcaggaggcggcagagcgggccgttcaacccctccagcgtgcct
tccgcagggatgccctccgcatcgatttcgagcgctccggtatctcaggctccgcctcca
caacccttagcccccaatggatcagtcatctccgagagtgattcctttggattcggcgag
gcgtcggggacgagtacgcctctggcgagcaccttttcgcgggcgggccgcgctcgccag
gaatctctacacaccgacccgttccggacgacgtcgagcgacttgttcgattcgagcatg
ggtggagcggacatggacgtcgacggaaggggatacgcgagcatagccgcgctggatgag
aaaggcaagcgcgctatagaacccgacgaaggtttgggcgtgggaggaaagacctcgaag
ccgaggacgctgggaggagaccggcctcgggaggctgtgagacccaaacagcttggtatg
gcgcagccagcacagggaagcgtcgtggtcgctggagggtccgggctaggcgtcaactta
cccacaccaccgctactgacgttcctgagcgtggcggtgaaggtgtccggaggcgggtcg
accgatgcggtgcttgaagggaggaatccggagaatggtggtgcgaatgaggtgctgttc
gcacagggaaagcaaacgcagtggttggactacttgccttcccctgtttcgatcttggcc
gcatcgagccatttctgcgcggtggctttggtggatgggtcggtgaatatctattcccac
acagggcgcaggttaatgcccacgctgagcttaggatcgccgtgctcctacctcgatgct
tgtgaggattccctgatggcattgacgtcgtcagggcagctgtacgcgtggaatgtgaag
caacaacgcgcagtatacagtccggtatcgattcttccgatcctccagccatctgcatgc
gaagtcctctccgcctccgttcgcgccaatggctctcccgtcatccagttatccaccggc
gttgcgcattcctacgaccctggtctgtccacctggatcaagctcagcgacaaatggtgg
atggaaggctccgacgtgtggcagggccgcgggcgcggcaacaatacgggcgctcgggga
cacggcgtcgtcgccgcggtcgaacagagcataaacgagctcgtgcgcggagccggtgtg
ctcgacaatgacgcgtacaatggtgcggccgcggcaggcgagaagcctcgacctgagtgg
tggaatgctgccttgacgctggggcatttggaaagcaagatgtctgcagccaaagtcctg
gacagtccgtcagagtacaagcaggtgctgttggtgtacgcccagcgaatagccaacgag
gggtttaggagcaaagccgaggaattggtgaaagagcttttcgggccggtctactggcgg
ccaggtaaggacgagtcctggtgtccgacggtgctcggcatctcaaagcgtgacttgctg
aaagaagttttgaatatatttgctcgaagcaagacactgacgaagcttgccatcgactgg
caggatcttctcaagaaggctcaatga
DBGET
integrated database retrieval system