Punctularia strigosozonata: PUNSTDRAFT_104291
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Entry
PUNSTDRAFT_104291 CDS
T03131
Name
(RefSeq) SNF2 chromatin remodeling protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
psq
Punctularia strigosozonata
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psq03021
]
PUNSTDRAFT_104291
Transcription machinery [BR:
psq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
PUNSTDRAFT_104291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_MROH2B_C
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_GCN1
TOR1L1_N
CLASP_N
HEAT_ECM29
ARM_TBCD_2nd
mTOR_dom
ARM_ECM29
Dopey_N
Motif
Other DBs
NCBI-GeneID:
18875852
NCBI-ProteinID:
XP_007385162
JGI:
104291
LinkDB
All DBs
Position
Unknown
AA seq
1935 aa
AA seq
DB search
MTSRLDRLLILLDTGSSTNVRTTAAKQLAQLAAKSVISDVAVEEDVKSTRHHAAVDPAAW
AELMAVIARILPYLHSKSHETRTAASVALSQIWTLVPIWTPAPPVKSEADADSAPVNPPE
FPNFSVRELMAKGTLLLASSGKEFTKPANLLASSAEVKKARKDAMSRLGLDFLDALGGDE
DSMDLDQELAGDDALASDSENVKQEVKQEESTVSPTDTDVVMKESSPPPRAKSATPAGTP
GPSMSPPPEQDLSALSARERNRLKRKRKPGNSAFVAAPPPAPQGSKYTPASAGQASSKAR
LVEADEDQSAAASRLSTPNSTNGNSGAQDKVVIDPTKGGAVSPKAPQQSKALEVPPGVWV
WDGIVKLLEVDLFSPAWEVRHGAAMALRELLKTQGHHGGMKDELPPAENEMAHERWCNDL
AAKFLCIFVLDRFGDFVSDQVVAPVRETVSQTLASLLLHMPRRSVLHVHDILLQMIRQDF
PLLPKPANGKGSARARDTNHVWEVRHAGLLGVKYEVAVRKDLVEAPPKAEDDLRMEDGVP
SEGRDVLQGVVDAAILGLGDQDDDVRSVAASCLIPVARQVVEQIPQALPQILSVLWNCLS
EIKDDLSSSVSAVMDLLGKLVAYDSVIAILADRNLSHSLADLAPKLFPFFRHTISTVRLT
VVKTLHSFMSISSLSQEWIGVPFLSLLFQNLVVEERPDVRAATLAAWKAAMPIVCSSVDR
AELSVPQPTLLGWYQTLMMPIGVPIDSSTFYHASLSDSGGERHNVDKHMLAQDLSLVSAD
VVMQARLASASAQAALIAAWPATGEAFENMFRPILMHYIDSTSMLQKLLAAIITEEWARE
AEARSSQPLIERCALAQDLSAKTLAFLQESPPLSYHEMAFTLARLHSECYSLLHGFAHDC
KVPAASIPTLGTEIDVTGQNPSCFTIDTAQSVVSSMFDQLKESLGRTKKRELAILVEKRA
QVAANVERYTAAKTQHDIRVSAAFAATFIALKGMPEKVSPVVKGIMSGIKSEENIDLQTR
SAVAVAAFVDFCAAHHLAQPPDKIVKNLCTFLCQDTERTPTFAYTRKQKAGILSFREPGS
SKTSTANGKSKGEPAAADGNSSHSLSRRGAGLAFAQLSARFGPRLLDVIPGMWHSMAGGL
LSSCATDSPTEADSLISKQYGQDVIDSLSVLEAVVPTLHEDMWPKIRTLFPMITLALRSQ
FAIVRQSAARCLSTICSTMTLETMRYVIENILPFLGDAVNLANRQGSMELIYHIVQKLDI
KALPYVLFMIVPVLGRMSDSDDDVRATATNTFASLVKMVPLEAGLPDPPGFSDDLMKRRD
EERQFLTQLLDGKKVEEYKLPVSIKAELRHYQQEGVNWLAFLAKYQLHGILCDDMGLGKT
LQSICILASKHYERAKRYEETQSPDAVHLPSLIVCPPTLTGHWYYEIMKYAENLKPVTYT
GNSRERGKLLGKLKKYDVVITSYEVVRNDVANLEQIDWHYCILDEGHVIKNAKTKLTKAV
KCMRAQHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEQSFNERFSKPILQNRDGKSKNG
EAAALALEALHKQVLPFLLRRLKEDVLHDLPPKIIQDYYCELSDLQKQLYDEFSQSQARS
QAEVVVHSGPSEGGKESHHVFQSLQYLRKLCNHPALLLKNDPAALSTALEKVGAKKDPSA
LSDIQHAPKLLALKQLLSDCGIGTASGNADEKADYLVSETGAFSQHRALIFCQMKQMLDI
IENDLFKQFMPSVTYMRLDGSTDANKRHAIVQTFNSDPSIDCLLLTTHVGGLGLTLTGAD
TVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITKGTLEEKIMGLQRFKLNIANSVV
TQQNAGLSSMDTDRVLDLFRRTSEEEDAAAAAKQKAKEADKSVSQKNVLQGLEELPAEEE
YEGLDLASFMSSLGR
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atgacttccagattggatcgtttgctcattcttctagacaccggatcgtcaacaaatgtt
aggactactgccgcaaagcaactggcccagctggccgccaaaagcgtcatcagcgatgtc
gcggtggaagaggacgttaagtctacccgccaccatgccgccgtcgaccctgcggcatgg
gcagaattaatggctgttatagcacgaatattaccctacctccactccaaatcccatgag
acgcgtactgctgcatccgtcgccctctcacaaatatggacactcgttccgatatggact
cccgcgccccctgtgaagtcggaagcagacgcagatagcgcgcctgtaaaccccccggag
ttccctaacttctccgtccgggagctgatggcgaagggcaccctcctcctggcgtcgtct
ggcaaggaattcaccaagccggcgaaccttttggctagttcagcggaggttaagaaagct
cgcaaagatgccatgagccgtctcggtctcgattttcttgatgctctcggcggcgatgaa
gacagcatggacctggatcaagagcttgcaggggatgatgccctcgcgagcgattcggag
aatgtcaagcaggaggtcaagcaggaggagtcgacagtgtctccgactgacaccgacgtc
gtcatgaaagagtcttcgcctccacccagggccaaatctgctactcctgcaggcacgcca
gggccgtcgatgtccccgcctcccgagcaggatctcagcgcgctctctgctagggagcga
aaccggttgaagaggaaacggaagcccggaaactcggcctttgttgccgcaccacctcct
gcaccgcaaggttcgaaatacaccccggcatcggcgggtcaggcaagctcaaaggcgcgc
ctagtagaagcagacgaggaccaatcagccgccgcgtcgcgcctatccactcccaactct
accaacggcaacagcggagcgcaagataaagtagtcatcgaccccaccaaaggaggggcg
gtgtctcctaaagctccgcagcaatctaaggcgctcgaggtccctccgggagtatgggta
tgggatggcatcgtcaagctgcttgaagtggacctgttcagtccagcgtgggaggtccgg
cacggcgccgccatggctcttcgcgagctgttaaagacgcaaggccaccatggcggcatg
aaagacgagctccctcccgctgagaacgaaatggcgcatgaacggtggtgcaacgacctc
gcggcgaaatttctctgcattttcgtcctcgaccggtttggcgacttcgtctcggatcag
gttgtggcccctgtacgagagacggtgtcacagacgttggcatcgctcctcttacacatg
cctcgtcgctcggttctccacgtccacgatatcttgctccagatgatccgccaggacttt
ccactgctccccaaaccagctaatggcaagggttccgcgcgcgcgcgcgacacgaatcac
gtttgggaggttcggcatgcgggtctgctgggggtcaagtatgaagtcgccgttcgcaaa
gatcttgtcgaagcacctccgaaggctgaagatgacctgagaatggaagatggagtaccg
tccgaagggcgcgatgtattacaaggcgtggtcgatgccgccatcctcgggctgggtgac
caggacgatgatgttcggagtgtcgcggcttcttgcctgatacctgttgcgcggcaagtt
gtggagcagataccccaagctctgccccagatccttagtgtgctgtggaattgtctgtcc
gagatcaaagacgacctgagctccagcgtgagcgctgtcatggatctactcgggaaactc
gtagcctacgactccgtcattgccatcctggcagaccgcaatctttcccactcattggcg
gatctcgccccgaagctcttccctttcttccgccacacaatctccaccgttcggctcaca
gtcgtcaagaccctgcattcgttcatgtcgatatcatcgctaagccaagaatggatcggc
gtccccttcctctccctcctcttccagaatctcgtggtcgaggagcgcccagacgtccgt
gcggccacgcttgcggcctggaaagcggcgatgccgatagtgtgctcctcggttgaccga
gcggaactgtccgtgccgcagccgacattattgggctggtatcagacattgatgatgcca
atcggagtgccgatcgactcgtccacgttttatcatgctagtctctctgacagcgggggc
gagaggcataatgtggataagcacatgctagcgcaggacttgtcgctggttagtgcggac
gtcgtcatgcaagcgcgattggctagcgcgagcgcacaagctgcgcttatagcagcttgg
cctgcgacgggagaagccttcgagaacatgttccggccgatcctcatgcactacatcgac
tctaccagcatgctgcagaagcttctcgcagccatcatcacggaagagtgggcgagagag
gcggaagccagatcttcccaacccctcatcgaacggtgcgccttggcccaagatctaagc
gcgaagaccctcgcgttcctccaagaatcgccaccactatcctatcatgagatggccttc
acgctggcccgtcttcacagcgagtgctacagtcttctccatggttttgcgcatgactgt
aaggtacccgctgcgtcgatccccactctcggcacggagattgacgttaccggtcaaaac
ccgagctgcttcacgatcgatacagctcagtccgttgtcagttcgatgttcgaccagttg
aaagagagcctgggccgtacgaagaagcgagagcttgccattctcgtcgagaaacgggct
caggtggccgccaacgttgagcggtatacagctgcgaagacgcaacacgacattcgggtg
tccgcggctttcgctgcaacgtttattgccctcaagggtatgccggagaaagtcagccct
gttgtcaagggaatcatgagcgggatcaagagcgaggagaatatcgatctccagacgcga
tctgctgtggccgtggcagcgttcgtcgacttctgtgcagcccatcatctggcgcagccg
cccgacaagatcgtcaagaatctctgtacattcctatgtcaggatacagagcgtactccc
accttcgcctatactcgcaaacagaaggccggcattttgtccttccgagagcctgggtca
tcaaagacatccacggccaatggcaaatcaaagggtgaacctgcggcagcggacggtaac
agcagccattcgctgtcacgcaggggtgcgggccttgcattcgctcaactttcggcaagg
ttcgggccgcggctattggacgtcatcccaggcatgtggcattcaatggcgggaggtctg
ctctcctcgtgcgccacagactcacctactgaagcggattcgctaatcagcaagcagtac
ggacaggatgtcattgactccctcagcgtgcttgaagctgtcgtgccgacacttcacgaa
gatatgtggcccaagatccgcaccctcttccctatgattacccttgcactccgaagtcaa
ttcgccattgtgcggcaatcggcggctcgatgcctttcgactatatgcagtactatgacc
ctcgaaaccatgcgctacgttatcgaaaacatccttcctttcctcggcgacgctgtaaac
ctagctaatcgacaaggctctatggaacttatatatcatatcgtacagaagcttgatatc
aaggcactaccctacgttctcttcatgatagtcccggttcttggtcgtatgagcgactcg
gacgacgacgtcagagctacggcgaccaatacctttgcgtcgttggtgaagatggttccg
ctcgaggctggtcttccggaccctcctgggttctccgatgatttgatgaagcgccgcgac
gaggaacgtcaatttttgacccagctgcttgatggcaagaaggtcgaggagtacaaattg
ccagtttctatcaaagccgagttacgtcattaccaacaggaaggcgtgaactggcttgca
ttcttggcgaagtaccagcttcatggcatactttgtgacgacatgggcttgggaaagaca
ctgcagtcaatctgcatactcgcgagcaagcactacgaacgcgcgaaacgctacgaggaa
acccaatcgccggacgctgttcacctcccgtcgttgattgtctgccctccgactctcacc
ggtcattggtactacgagatcatgaagtacgcggagaacctcaaacccgtgacgtacact
gggaactcgcgcgagcgaggcaagcttctcggcaagctcaagaagtatgacgtggttatc
acgtcgtacgaagttgtccggaacgacgtagcaaacctcgagcagattgactggcattac
tgcattctcgacgagggtcacgtcatcaagaacgcgaagacgaagctcacgaaagccgtc
aaatgcatgcgagcgcaacatcgcctcatcctttccggtacacccatccagaacaatgtg
ctcgaactttggagcctgttcgattttcttatgccgggcttcttgggaacagagcagtcg
ttcaacgagaggtttagtaagcctatcctgcagaatcgcgacggaaagtcaaagaatgga
gaagcagccgcgctggcgctcgaagctttgcacaaacaagtcctgcccttcctgcttcga
cgactcaaggaagacgtcttgcatgatttgcctccgaagatcatacaagactattactgc
gaattatcggacctgcagaaacaactctacgatgaattctcccagtcgcaagctcgttca
caggcggaggtggtggtgcactccggaccctccgagggtggcaaggaatcgcaccacgtc
ttccagtccttgcagtatcttcgcaaactgtgcaatcatcctgcattgctactgaagaac
gatcccgcggcgctctcaacggcattggagaaggtcggggcgaagaaagacccaagcgct
ctgagcgatatccagcacgcacctaagctgcttgccctcaagcaattactgagcgactgt
ggcatcgggaccgcctcaggaaacgcagacgagaaagccgattacctcgtctccgagacc
ggagcattctcgcaacatcgtgccctcatcttttgccagatgaagcagatgttggacatc
atcgagaacgatctcttcaagcagttcatgccctctgtgacgtacatgaggctcgacggt
agcacagatgcaaacaagcgccatgcgatcgtacagacgttcaactcggatcccagcatc
gactgtctcctcctcactactcatgtaggaggcttgggtttgacgctgactggcgcggat
acagtgattttcgtggaacacgactggaacccgatgaaggacctccaagctatggaccgc
gctcaccgcatcgggcagaagaaggtcgtcaacgtttaccgtttgatcaccaaggggact
ctcgaagaaaagattatgggtctccaacggttcaagttgaacatcgcgaactcggtcgtt
acccaacagaatgctggtctcagttcgatggataccgatcgggttctcgatctctttcga
cgaacgagcgaggaagaagacgcagctgcggccgcgaagcaaaaggcgaaggaagcagac
aagtccgttagccaaaagaacgtgcttcaaggcttggaagaactgcctgcagaagaagag
tatgaaggacttgatcttgcgagcttcatgagttcgcttggtcggtga
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integrated database retrieval system
