Punctularia strigosozonata: PUNSTDRAFT_104997
Help
Entry
PUNSTDRAFT_104997 CDS
T03131
Name
(RefSeq) ribosomal protein S5 domain 2-like protein
KO
K12587
exosome complex component MTR3
Organism
psq
Punctularia strigosozonata
Pathway
psq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PUNSTDRAFT_104997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_104997
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PUNSTDRAFT_104997
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
FA_synthesis
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
18875915
NCBI-ProteinID:
XP_007385631
JGI:
104997
LinkDB
All DBs
Position
Unknown
AA seq
266 aa
AA seq
DB search
MALNTDRRRINGPEESFHPDFVERQATSDSSKRWNPGEPRNGRGASDIRPIFLKAGLISQ
ANGSAYIETERTKLVCAVYGPRQSKSTSYSEKGKLNVEVKFAPFSCTRRRVPNRDAEDRP
IAMLIQRSLNAAVRLELFPKSTIDIFITIIENDGIEGCVASGTVAASTALAQARIEMLGM
VMSCSAANTADVGKELWLDPTDAESRLASGILVLACLPALGIVTNVWQSGKMIPARAIDC
MKACQERCADIHSVVAQALLDNVKET
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcccttaacacggacaggaggcgtatcaatgggccagaagaaagctttcatcctgac
ttcgtggaaagacaagccacctccgattcatccaaaagatggaatccaggtgaaccacga
aatgggcggggcgcgagtgatattcgacctatatttctgaaggcagggctgatcagtcaa
gccaacggatcggcatatatagagacggagagaaccaagcttgtttgtgctgtttatggg
cctcgacaatcgaagagcacttcgtatagcgaaaagggcaaacttaacgttgaagtaaaa
tttgcccccttctcctgcaccaggaggagagtacctaatcgcgatgcagaagaccggcct
atagcaatgttgattcagcgatcactgaacgccgccgtacgactagaattgtttccgaag
tccaccatcgacatcttcatcacgatcattgaaaatgatggtattgagggatgtgtggcg
tccggtacagtcgctgccagcacggcgttggctcaagcccgaatagaaatgctgggcatg
gtcatgtcttgttccgcggcaaacaccgcggatgtcggaaaggagctctggcttgaccca
accgatgcggaaagtcgtttagcaagcgggatcctcgttcttgcgtgcttgccggcactc
ggcatcgtcaccaatgtgtggcaaagcgggaaaatgattcccgctcgcgccatcgactgt
atgaaagcgtgtcaggaacgctgcgccgatatacattctgttgttgctcaagctttgctc
gacaatgtgaaagagacgtga
DBGET
integrated database retrieval system
