KEGG   Punctularia strigosozonata: PUNSTDRAFT_117746
Entry
PUNSTDRAFT_117746 CDS       T03131                                 
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
psq  Punctularia strigosozonata
Pathway
psq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PUNSTDRAFT_117746
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psq03019]
    PUNSTDRAFT_117746
Messenger RNA biogenesis [BR:psq03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     PUNSTDRAFT_117746
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     PUNSTDRAFT_117746
SSDB
Motif
Pfam: EXOSC1 ECR1_N
Other DBs
NCBI-GeneID: 18876947
NCBI-ProteinID: XP_007379092
JGI: 117746
LinkDB
Position
Unknown
AA seq 186 aa
MASEIVLPGQPLALPRGPVPQLGTGIYLRGGQVRASLIGEPRYQGSTLAIHTVRPHPPAP
NSVVLGSVTRLSPLQANVAITVVDGVPLPAGEEFTGIIRVQDVRATEKDKVKIADCFRGG
DVVKGVVISLGDARSYYITTARNDLGVIFATSEAGATMEPVSWQEMRCPKTGRTEKRKCA
KPETLQ
NT seq 561 nt   +upstreamnt  +downstreamnt
atggcctccgagatcgttctgcctggacagcccttggccttgccgagaggaccagtgcct
caactcgggacgggcatctacctgcggggtggccaagtgcgcgcgagtttgatcggtgaa
ccaagataccaaggatccacgcttgcgatccacaccgtacggccgcatcctccagctccg
aactccgtcgtgctcgggtcagtcactcgactgtcgcccctgcaagcaaacgtagcaata
accgtggtcgacggcgtgcccctgcccgctggggaggaattcaccggtatcatacgcgta
caagatgtgcgcgccaccgaaaaggataaagtgaagattgcggattgcttcagaggtggc
gacgtcgtgaaaggcgtcgtgatttctctgggggatgctcgtagctactacatcacaaca
gcccgcaacgatctgggcgtcatcttcgctaccagcgaagctggcgccacgatggaaccc
gtgagctggcaagaaatgcgatgtcccaaaaccgggcgcacggaaaagcggaagtgcgcg
aagccggagaccctgcaatag

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