Punctularia strigosozonata: PUNSTDRAFT_118369 Help Entry PUNSTDRAFT_118369 CDS       T03131                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism psq  Punctularia strigosozonata Brite KEGG Orthology (KO) [BR:psq00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:psq03021]     PUNSTDRAFT_118369 Enzymes [BR:psq01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      PUNSTDRAFT_118369     5.6.2.5  RNA 5'-3' helicase      PUNSTDRAFT_118369 Transcription machinery [BR:psq03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      PUNSTDRAFT_118369 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 AAA_30 UvrD-helicase nSTAND3 NAT10_TcmA_helicase DEAD AAA_25 ResIII AAA Motif Other DBs NCBI-GeneID:  18877016 NCBI-ProteinID:  XP_007380161 JGI:  118369 LinkDB All DBs Position Unknown AA seq 1879 aa AA seqDB search MSDVLEYLMGLPKSSDSATHWFCVHAKPVTREAATFLIRLFAFDGRQANEWKERLKDCLT SCALCVKCFQEVKFTSRRTYFGVFSDNILATFWSAFDKWERQLVKEQLSKATSSSAKRCT LEDLPTPLITHLLSNTAMLLEPDLLDFVCTSIPSGNLDELPMDPPPVCVWYLALHEDDRV RQWSKEQMMLCKRVPISAETFEVAYHRSSLMDDAIAAISGKGRKNSVKFPFAVEAGPLWS AFVGLIRLLPPELLKPRDKSRADVSQIILGHLHDQGSHFQDVLKCFLYLLQRLGSELWKG EKTEYPQVIFDAIKDNHRYVDLVASTRPGIEKPWHLGWYTEFLQSLWKHAQFPEILARMT GFVCEELQHERFEDVRPIIMLNAVRTLRWALLKDEGDEDKKTHQAAVLNALDIHADILVT VAFGKPYRDAKWASARNTIRDFIKIVLIMDQQHVSASITQLCRILARHDTAVVVPSVRTQ MWQKMYRAVQGDDSDAVATLVAILARSAHMGFLHESAFKAALEGSPARDAFTKVNQAFQL FRNGFVDTISRYTNYSNEPKILDMLQRPGLVKDIVMLMFSPSEEMHSGAQNLVEQAFNVD GRADCFRALLENLPHATLSAIFDVLETFVQYAPIVPEACSFSKVLVLCLTDILEVLCSTP DGLLRHPRFLKPEEGSDLAAEIRKLWTWTTKAIALVFKRTPAWSAYFDSEEMILWMRDAL IFGRDLLSQRRFLTSVVATGPQQPRSGNAGSTKKAKQLSLSMINDLQVVLPELVRWLRLT NEELLYQSFALVQSLLECFHEAGVSPPHELMGKLRRHVEDGRNKQQKQTRLDASRIDKLE QCLAAFEDSDDDVEIVEVKQAPPTQVKLEKNRERVPSAAPKPSVTSRKALEQKQDVSAGQ GTSSRLPPVWDRKAGNQLTVLPRAPPGTSKIASSAPAKSSTTTIASGGDSSSSSSEDEES EGDERGLKGLAALANLQSTPKIKKPERRQVKLLDIPTGKNPMQERLNKRDDIRRNGLRLK PDISGLHRAVLSWDYDHNGNEPPFKEPPKLLRVPDSFRDHDQYRSVFEPLLLLECWAQIV QSKDEPAETYECQLISRQFVDDWMDVDITIGESVRKDWSLGETDIVLLRQPESKRAMLAK VQTYRASPRGIQATLRCSNRAGGDSSLQLNTTWRVRKVFSLSTLHREYASLMALPYYDFF HHIMRPRLGGKPRLQDDEVKSAMKAYGLNEPQAKAVLSSLRAESFSLIQGPPGTGKTSTI CGLVQAYLASRRKPATNIQAGRATAASDTAPVKKVLVCAPSNAAIDEVASRLKEGLSGSG KRGIQPKVVRVGADKALNISVKDIALDALVEQKMNAAPNAKELNKDSNAEIIALRQEIEA VKQQRAQKFEEITNTHDNAVKTQSLEEEARSLNAKRMALSQRLDKLRDQQKSASRSLDAA RRKYRTEVLQEADVICSTLSGAGHDVLEALEIDLVIIDEAAQAIELSTLIPLKYPCKRCV MVGDPQQLPPTVLSQEACKYQYNQSLFVRLLKDQPEAIHLLSIQYRMHPEISRLPSQIFY DGRLQDGPDMAEKTKQPWHRHAKFGPYRFFNVNRGQEEPGRAKSLMNKAECQVAVALYTR LRREFSSIDLDFRVGVVSMYRAQIFEMRRAFEQRFGAEIVGKVDFNTVDGFQGQEKDVII LSCVRAGANLHSVGFLSDTRRMNVALTRARSSLFVLGHSPTLENGDKTWSKIVNDARSRS CHIDVDVNYFTTPGHSTLPSPIPSVKNPVRSVAQRQDPAVEGLMTPKELASGPSKAPVLK RESASDLIGNQVDGAKKSKHVVPEKRRAPVEAEHEHSADESAASRKPSVQNAKPKGPPPK RQKQGPNLFIPKTNKRPGH NT seq 5640 nt NT seq  +upstreamnt  +downstreamnt atgtcagatgtcttagaatatctcatgggactacccaagtcatcggactcagccacccat tggttctgtgtgcatgcaaagccggtcacccgcgaagccgccacgtttctgatacgcctg ttcgcgttcgatgggcgtcaagccaacgaatggaaggagaggctgaaggattgtcttact agttgtgcattgtgcgtgaaatgcttccaagaagtcaagttcacctcccggcgtacatac ttcggagtgttctcagacaacatattggcaaccttctggagtgcgtttgacaaatgggaa cgtcagcttgtgaaggaacaactatcgaaagcgacctcgtcttctgcgaagcgctgtact ctggaagatttacctacccctttaatcactcatctcctgtcgaacacggccatgctattg gaaccggatctacttgactttgtttgcacctccatcccttcgggaaacctggacgaacta ccgatggatccacctccagtatgtgtgtggtatctcgcattgcacgaagacgatcgagtt agacaatggtccaaggaacaaatgatgttatgtaaacgtgtaccgatctctgccgagacg ttcgaggttgcataccataggtcatccctgatggacgatgccatagccgctatctctggc aaagggagaaaaaactctgtcaaatttccattcgctgttgaagcggggcctctgtggtcg gcattcgtgggcctcatccggctcttgcccccggaactcttgaagcctagggacaaatcc cgtgcggatgtcagtcagatcatactcggacatctgcatgaccaggggagccattttcag gacgttctcaagtgtttcctatacctgctacaacgccttggcagcgaactgtggaagggc gagaagactgaatatcctcaagtaatctttgacgctatcaaggataatcatcgctatgtg gatctcgtcgcgtccacgagacctggtatcgagaagccctggcatctgggatggtacacg gagttcctccagagtctctggaagcatgcccaatttccggagatactagcgcggatgacg gggttcgtctgcgaagagcttcagcacgaacgattcgaagacgttcggcccataatcatg cttaacgctgtgaggaccttgagatgggctttgctgaaggatgaaggcgacgaggacaag aagacacaccaagcggctgtgctaaatgccctggacatccacgccgacatcctcgtgacc gtggccttcggtaaaccgtatagagatgcaaagtgggcctccgcacggaatacgatcagg gacttcatcaagattgtcttaatcatggaccagcaacatgtttctgcgtcaatcacccaa ttatgccgaattttggctcgtcacgacaccgcggtcgtcgtcccgtctgtcaggacccag atgtggcagaagatgtaccgcgctgtacaaggcgatgattccgatgcggtggctacgctc gtcgccatattagcgcgctccgcccatatgggcttcttgcacgaaagcgcctttaaagcg gctttggaaggaagtcccgcacgagatgccttcacgaaggtgaaccaagcgtttcagctc ttccgcaacggttttgtcgataccatctcgaggtacacgaactacagtaacgagccgaag atcctcgacatgcttcagcgtccggggctcgtcaaagacatcgtaatgttgatgttctct ccgagcgaggagatgcattccggggcacagaatcttgtagaacaggctttcaacgttgac ggtcgcgctgactgcttccgcgcccttcttgaaaaccttcctcacgctacgctcagcgcc atctttgatgtcttggagacttttgttcaatatgctcctatagtgccagaggcatgcagc ttttccaaagtccttgtcctatgccttacggacattcttgaggtcctctgttccacccct gatggacttcttcgtcatcctcggtttctcaaacctgaagaaggttctgatttggccgca gagatacgcaagctctggacttggacgaccaaagccatcgccctcgtattcaagcgtacg ccggcgtggtcagcgtacttcgatagcgaggagatgatcctatggatgcgcgatgcattg atattcgggcgtgacctgctgtcgcaacgaaggtttcttacctctgtagtggcaaccgga ccccagcagcctcgctctgggaatgcaggttcgacgaagaaggccaagcaattgtctttg tcgatgatcaacgatcttcaagtggtcctgccggagcttgtccgttggctgcggctaacg aacgaagagcttctctaccagtcattcgcccttgttcaatccctattggaatgttttcac gaagcgggtgtttctcctccacatgagttgatgggcaagctccggagacacgttgaagat ggtcggaacaagcagcaaaagcagacgagactggacgcctcccggatagacaagctggag cagtgccttgcggcgtttgaagatagcgatgacgacgtagagatcgtcgaggtcaaacaa gccccgccaacgcaagtcaaactggaaaagaaccgggagcgggttccatccgccgctccc aagccctcggtgacgtctcggaaagctttggagcagaaacaagacgtttctgcgggacag ggaacttcttccagactgccccctgtttgggatcgcaaggcaggaaaccagttgactgtc ctacctcgtgcaccacccggaacgtccaagattgctagcagcgcgccagccaaatcaagc acgactaccattgcatcggggggcgattcctcctcatccagcagcgaagatgaggaaagt gagggcgatgaacgcggcctcaagggcttggctgcgttggcaaatcttcagtctacgccc aagatcaagaaaccggaacggcgccaagtcaagttgcttgacataccgacgggcaagaat cctatgcaggagcgcttgaacaaacgcgacgatatccgtcgcaacggccttcgtttaaaa cctgacatatctgggcttcaccgtgcagtcctttcttgggattatgatcacaatggaaac gagccgcctttcaaagagccgccgaagttactccgggttcccgactccttccgcgatcac gaccagtatcgcagcgtctttgaaccgctactactgttagaatgctgggcccagattgtt cagtcgaaagacgagcctgcggaaacgtacgaatgccaattgatctccaggcagttcgtg gacgactggatggacgtcgacatcacaatcggcgaatctgttcgcaaagattggagcttg ggcgaaacagatattgtgctcctgaggcagcccgaaagcaaaagggctatgctggccaag gtgcagacttatagagcgtctccccggggtattcaagcaactctcagatgctcaaacaga gcaggtggcgactctagcttgcaactaaacaccacttggcgtgtccggaaagtcttcagc ctgagtacgttgcaccgcgagtatgcctcattaatggccttgccctactacgatttcttc caccacattatgcggcctcggctgggagggaagccccgtttgcaagacgacgaagtaaaa tctgccatgaaggcgtacgggctcaacgaacctcaagccaaagcagttctcagctcccta cgagcagagtcgttctctcttatccaagggccgccgggtacaggcaagacttctaccata tgtggattggtacaggcgtacttggctagccgacgcaagcctgcaacaaacatacaagca ggtcgagcgacggctgcctcggatactgcaccggtcaagaaagtgctcgtatgtgcgcca agcaatgcagctatcgatgaagttgcctcccgcttaaaggaaggtctctctggttccggt aaacgtggaatacaacctaaggtagtccgcgttggtgcggacaaagccctgaacattagc gtcaaggatatcgctctggacgctctagtggaacagaagatgaacgctgcgccgaatgcg aaggagcttaacaaagactccaacgcggagattatagctttgcgccaagagatagaggct gtgaagcagcaacgagctcagaaattcgaggagatcaccaacacgcatgacaatgcagtg aagacgcaatcccttgaggaagaagcgcggagtctcaatgcgaagaggatggctttatcg cagcgcctcgacaagctgcgagaccagcagaagtccgcatcccgttctcttgacgctgcg cgccgcaaatatcgcacagaggttttgcaagaagcagacgtaatctgcagcacattgtcc ggcgccggtcacgatgttctcgaggccctcgaaattgacctggtcatcattgatgaggcc gcccaagctatagaactcagcacgctgatacccttgaagtatccatgcaaacgatgcgtc atggtgggagacccgcaacaactgccgccaacagttttgtcccaagaagcgtgcaaatat caatacaaccaatcgttgttcgtcagacttctgaaggaccaaccggaggccatccatcta ctgagcatacagtatcgcatgcatccggaaattagtcgtctacctagccaaatcttctac gatggacggcttcaagatggtcctgatatggccgaaaagacgaagcaaccatggcacagg catgcaaaattcggaccatatcggttcttcaacgtcaaccgagggcaggaagaaccaggc cgtgccaaatctctgatgaacaaggctgaatgtcaagtcgccgtggccctttacactcgc ctacgacgagagttctcctccatagatctcgattttcgagttggcgtagtctccatgtac cgagcgcagatcttcgagatgcgtcgagcgtttgaacagcgcttcggagccgagattgtc ggcaaggttgatttcaacacagtcgatggattccaaggccaggagaaggatgttatcatc ttgtcctgcgtacgtgcgggcgctaatcttcattcagtcggcttcttgtctgatactcgc cgcatgaacgtggcccttacgcgagcgcgttcgtctcttttcgttctcggccattctccg acccttgagaacggtgataagacatggtcaaagattgtgaacgacgctcgttcgcgatca tgtcacatcgatgtggatgtaaactattttacaacccctggccattcaactctgccgtcg ccgataccatcagtcaagaatccagtgcgatccgttgcgcaacggcaagatcctgcggtg gagggattgatgacgccgaaggaacttgcctctgggccttccaaggcgcctgttctgaag cgcgagtctgcgtctgacctcataggcaatcaggtggatggggcgaagaaatccaagcat gtagtgccggaaaagcgccgggctccggttgaagccgaacacgaacactcggcagacgaa tctgccgcgtcgcgaaaaccatctgtgcaaaacgcgaaacccaagggtcctcctccgaaa cgtcaaaagcaaggcccgaaccttttcataccaaagaccaataagcgacctggccattag

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