KEGG   Punctularia strigosozonata: PUNSTDRAFT_119116
Entry
PUNSTDRAFT_119116 CDS       T03131                                 
Name
(RefSeq) Sm-like ribonucleo protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
psq  Punctularia strigosozonata
Pathway
psq03040  Spliceosome
psq04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PUNSTDRAFT_119116
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    PUNSTDRAFT_119116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psq03019]
    PUNSTDRAFT_119116
   03041 Spliceosome [BR:psq03041]
    PUNSTDRAFT_119116
   03032 DNA replication proteins [BR:psq03032]
    PUNSTDRAFT_119116
Messenger RNA biogenesis [BR:psq03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     PUNSTDRAFT_119116
Spliceosome [BR:psq03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PUNSTDRAFT_119116
  U2 snRNP components
    PUNSTDRAFT_119116
 Complex B
  U1 snRNP components
    PUNSTDRAFT_119116
  U4/U6.U5 tri-snRNP components
    PUNSTDRAFT_119116
 Complex C
  U2 snRNP components
    PUNSTDRAFT_119116
DNA replication proteins [BR:psq03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PUNSTDRAFT_119116
SSDB
Motif
Pfam: LSM SM-ATX LSM14
Other DBs
NCBI-GeneID: 18877121
NCBI-ProteinID: XP_007381443
JGI: 119116
LinkDB
Position
Unknown
AA seq 127 aa
MPQEGLGIPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDGRVSQ
LDQVYIRGSMVRFFIVPDMLQNAPMFKRVGPNAMRGRGIGTARGRATIMRANARRGRGVP
APRGIRR
NT seq 384 nt   +upstreamnt  +downstreamnt
atgcctcaagaaggactcggtatccccgtcaagctcctccacgaatctttaggtcacatt
ataacggttgagctcaagacgggccagctctaccgtggcaaacttgctgaagccgaggat
aacctgaacatctccttgaaagacataacagtcactggacgtgacggacgtgtgtctcag
ttggatcaggtctacatccgtggcagtatggtcaggtttttcatcgtgcccgatatgttg
cagaacgcccccatgttcaaacgcgtgggcccgaatgccatgagaggaagaggtattggc
acggctcgtggacgagcgaccatcatgcgcgccaacgctcgtcgtggtcgcggtgtgcct
gcgcctcgtggaatccggcggtaa

DBGET integrated database retrieval system