Punctularia strigosozonata: PUNSTDRAFT_119839
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Entry
PUNSTDRAFT_119839 CDS
T03131
Name
(RefSeq) hypothetical protein
KO
K14311
nuclear pore complex protein Nup188
Organism
psq
Punctularia strigosozonata
Pathway
psq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PUNSTDRAFT_119839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_119839
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PUNSTDRAFT_119839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_C
Nup192
XPC-binding
MrpR_C_cat
Motif
Other DBs
NCBI-GeneID:
18877200
NCBI-ProteinID:
XP_007382537
JGI:
119839
LinkDB
All DBs
Position
Unknown
AA seq
2041 aa
AA seq
DB search
MSAESSSRRSNLIDVTYQQLHSILTGHAEGISPDHTLAILRPRIERLQNIVEPFGTPSEA
SKKKVNSGTVTLADGVDVQVEDADKEFVFAISDRFNIDQVEALVLLRSFLYNEGLPAQAG
TDSTSSLVEELVEAITPFYHSERLSLLRTIIPLFRAHDDDTSPFFDVAGEVVPKIVTDGQ
TWADSLVTEYGRKTQASPPDALSSDPRGASRWSKQNLREQIVVLEILFWTMWSYVSCVGP
LVVRIFEMAYTTSLGGALQDTTLVLDEEGLQLQQDAKALWILIMLEVLELERVADPSELE
VSTDPADPSFYAHDPQSLTQLHELLTSSGHPQYSCIYMAWSFVLSRLSEKVAVAKEVPER
YRAFFESVRQKLGSRYTDREPVHILMARRALGPDVGLFQLMLDMLLMSPLFVTSIAWRTG
STVTDPNAVAFRSVLKGLLIAILELVPVELMPDFDALVEVWVALFGRSEPQSVAGICRQF
WQVDWHTGNARRAILDVARARFPIQSRPLIRLLRSMTASGFLDTDPLSTGDVAEGTMDEE
REICDQHVFYYLDKLPTFTQAIPISACTGPNALFEKAPDRYKDGNRPAGLKYTNTRSLRL
PGGSVLPAKSVGRLLSGDGGDVIIVAWQHEHSGWKLLLEILTDYVHRKRPFPGSRGPAEA
STLRRGKPDGQPLPLRLEDVGLEHDEDGDEALVTDALDLIRSVIRDEPVLAEQLLQSMEA
GEPVVAHTMSEAQPPDLVQLAAMILEEAFSRSASQRRVAPRTNLITSAMSILSELLALPK
YSNRVWLYIRSTAILFGSDRASGSTSSILAAERITGHYTMTLALLHLVQHLFYEASSSLL
PVVAENSRLQTIKEEVLLRATRFVHAEIWVEHSGWKYVHLGDRFEIGRRISVLYTEVLKQ
SPSGMDQPFATLRLAIVEALLSKATPSTIGPLVNIISSASPMLTALYASRRYGDARRLIF
LLEAHLRLIRTLLEHRSMIPDFKGVSLLEQLLCARGPANGLSLNGARAQVDHIETLASYI
KDRGMGNVTPLEATRVLHTLCASLASSFNTPTIVGHLSNPEATVASFVRIVQHPYDDLAL
RTSLWDFMAMAVDKEPALAGLFIHGEFRIPDVKGKGKAVPDQTKNSPVSALDTALDMLGQ
WKELWNLNPQILASVLRFIVAVWQHGMEHQSALESRRKDAELWACLAAIAQEDLGPAPDY
QSESWINDDGVRHSPLHDAVSSHAYHTITKSRALHIIGLDVDMHLQLRDRKDQIPDRPAS
YQAIEGCFKDEDQFTDCVLEAAASPYDPGLYDKFIEDAKARYGHLSLRQLQNQTPLVEHE
YGDDYMFSIPLLQRRLIPYRLVDEVQAQEADELERILASINLNLSLTNAQSCLTESWQYL
LLRVVPFLRGQASTRKVVLTLAVSISGNIASDSRSGDMMAAIHGQRLSLLLAMLEVAWFS
TTDTADEIQHFTDVVQNLRDIIVSDAQSPAKAVIGRVPIPFHKPLLQIIYFCVRHCRALI
RRPKALNAQQRLIFASTVDIALVFTVDALRCVFEAARSRLDLELDQDLELLVAVFEQCTR
TDITPSAAMWLARCQESDVVRCSMELFVHSDIAGLADLELLRVHRRPLYSLPVLMFHLAL
ASIPAAAEKLASEGVLVAYSNNSISSSISSGSVEVSLPELPGERSPAHEAYCTMLAIVSG
VVGTLGRQHHFFDAEASGLVQLYGGQISRALSWSVGDALTMPLVEEMEQVVELFSAIADS
TPHSATSGTAAEKVLKAFASHALFLLQQLTYALTHPNQLAGSLEPISAEERSMLEQDSRD
TSSSTLIVNPARRPFLARVIHRLYGLSSTILATLLSITHAEDVLIGDEEDWPIHMALAAP
HTKVIPGEPASMGTLLELGNASLDVLRHLSNQPVGQAISPAASTSPLSKPLDVGDAMSTA
ARNLENVLVFAVTQFAMWLARPNADELGEREMQVEDFGGSDEQRSERERRAARRTSLTLA
ERMRRGMTGEMAGDLQALLGKVKPLLEKTRTALKTDKEDVDLTDILVTFLHDRMLVASQS
V
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggagtcgtcgagcaggcggtcgaatctcattgatgtcacctatcagcagctg
cactccatcttaactggccatgcagaaggcatcagccccgaccacacacttgctatcctt
cgaccaaggattgaaaggctgcagaacatagtcgaaccttttggtacaccctctgaggcg
tcgaagaagaaggtcaacagcggcacggttacactcgcggacggtgtggacgtgcaagtc
gaggatgcagacaaagaatttgtctttgccatcagcgacaggttcaacatcgatcaggtg
gaagcgctcgtcctcctccgatcatttctctacaacgaaggcttaccagcgcaagccggc
acggactccacatcatccctggtcgaggagttagtggaagctataacccccttctatcac
tcggagcgactctccctcttacggaccatcatcccacttttccgcgcccatgacgacgat
acctctcccttcttcgatgttgctggtgaagttgtcccaaaaatcgtgacggatggtcag
acctgggccgactctctcgtgaccgaatatggccgcaaaactcaagcatctcctcccgat
gccctctcttccgatcctcgaggggcatctagatggtccaaacagaatttgcgcgagcag
atcgtcgtcctcgaaatcctcttctggaccatgtggagctacgtctcatgcgtcggcccc
ttagtagtgcgcatcttcgagatggcatacacgacaagtctcggtggtgcattgcaagac
actaccctggtcctggacgaggagggcttgcagctccagcaagatgccaaggcgctgtgg
atcctgatcatgctcgaggtactggaacttgaacgggttgccgatccatcagaattggag
gtctccacggatcccgccgatccaagcttttatgcccacgatccgcaatcattaacgcag
ctccacgaactcctcacctcctcaggccaccctcagtattcttgcatctacatggcttgg
tcgttcgtactgtcacggctatcggaaaaggtggcggtagccaaggaagtgccggaacga
tatcgtgcgttctttgaatcggtcagacagaagctcggcagtcgttacacggaccgagag
cccgttcacatactcatggcacggagggcactgggtcctgatgtgggcctcttccagctc
atgctagatatgctccttatgtcccccttatttgtgacatcaattgcatggagaacggga
tccacggtgactgacccgaatgccgttgcattccgctcagtgctcaagggtttgttaatc
gccatcctggagctggtaccagtagaactcatgcctgacttcgacgcccttgtggaagtc
tgggtggctctcttcggtcgcagcgagcctcagtccgttgcaggaatctgtaggcagttc
tggcaggtcgattggcatactggaaacgcacgtcgggctattttagacgtggctcgcgcc
aggttccctatacaatctcgcccactgatacgtttactacggtcgatgactgcgagcgga
tttctggatacggatcctctctccacgggcgacgttgccgaaggcaccatggacgaggag
cgcgaaatatgcgaccagcacgtcttttactaccttgacaagctacccacctttactcag
gccatcccgataagcgcatgcacgggtccaaatgctttgttcgagaaggctccagaccgt
tacaaggatggaaaccgtcctgcaggactaaagtacacaaacacacggtctttgaggctt
ccgggaggatcagtgctgcccgcgaaatccgtgggacggctcttgagcggcgatggtggc
gatgtcatcatcgtggcatggcagcacgaacactccgggtggaagctgctgctggagatc
ctgactgactacgtccaccggaagcgaccatttcccggctcacgtggaccagctgaagcg
tcaaccctgcggcgaggcaaaccggacggccaacctctccctttgcgattggaagatgtc
ggtttagagcacgacgaagacggcgatgaggctctggtgactgacgccctcgacctgatt
cgcagcgtcatacgcgacgagcccgtgcttgccgaacagctcctgcagtcgatggaggct
ggcgaaccggtcgttgcgcacacgatgtctgaagcacaaccgccagatctggtgcagtta
gccgccatgatcctcgaagaagcgttctctcgttcggcgtcccaacggagagtcgcgccg
aggacaaatctaatcacatccgccatgagcatcctttccgagctgctcgccttgccgaag
tactcgaacagggtctggctatacatccggtccacagcaatcctctttgggtccgatcgt
gcctctggatccacctcaagcatcttagccgcggaacgtatcaccggtcactataccatg
actttggccctcctccacttggtgcagcacctattctatgaagcatcatcttcgctgctc
cctgtggttgcggagaactcgcgattgcagacgatcaaggaggaggtgttacttcgtgct
acacgtttcgtacatgccgagatttgggtggagcattctggatggaagtacgttcatctc
ggagatcgcttcgaaatcggacgccgcatctccgtcttgtacaccgaggtcctgaagcaa
tcaccaagtggtatggatcagcccttcgcgaccctccgattggcgatagtagaagctttg
ttgtccaaagcaacgccttccaccattggaccgttggtcaatatcatatcgtctgcgagc
ccgatgctaaccgcgctctacgcgtcacgtcgatacggtgatgcgaggcgtttgatcttc
ctccttgaagcgcatcttcgcctcatacggaccctgctagagcataggagcatgatcccc
gacttcaaaggtgtatcgctcttagagcaactcctgtgtgcaagagggcctgcgaatgga
ctgtcgctgaacggcgcgcgtgcccaggtagatcacatcgaaacgctggcctcctatatc
aaggaccgcggcatgggcaatgtcacccctttggaggcgacccgggtcttgcacactcta
tgcgcgtccctggcgtcgtctttcaacacccctacgatcgtaggccacctttcgaatccg
gaagccacagtcgcgtccttcgttcgcatcgtccagcacccctacgacgatttagctctc
cgtacatcattgtgggactttatggccatggccgtcgataaggagcccgcattagcaggt
cttttcatccacggggaattccgcatacctgatgtcaaaggaaaagggaaggcagtccct
gaccaaaccaaaaactcccctgtcagtgcccttgacacggctttggatatgcttggtcaa
tggaaggaactgtggaatctcaatcctcagatattggcgtcggttcttcgcttcatagtt
gccgtatggcagcatgggatggaacaccagtcggccttagaatccaggcggaaggatgct
gaattgtgggcctgcctcgctgccattgctcaagaggatctcggccctgctcctgattat
caatcagagagctggatcaacgatgacggtgtccgacattctcctttacatgacgctgtc
tcgtctcatgcctaccatacgatcacgaagtcgcgcgctctccatatcatcggccttgat
gttgacatgcacctgcagttgcgcgatcgcaaggaccaaatccctgacagaccggcaagc
taccaggccattgaaggctgtttcaaagacgaggatcagtttacagattgcgtgctggaa
gctgcagcctccccgtacgatccagggctctatgacaaattcatcgaggatgccaaggcg
cgatatggacatctatcgctcagacaacttcagaatcaaacgccccttgtggaacatgaa
tacggtgacgattacatgttttccatacctcttctacagcggcggctcataccgtatcgc
ctcgtcgatgaggtccaagcgcaagaagctgacgaactagagcgcattctcgcatccatt
aacctcaatctctcccttacaaacgcccagtcctgtttgaccgagtcatggcagtatctg
ctcctgcgggtcgttcctttcttgcgcgggcaagcttccacacggaaagtggttctgaca
ttggcagtgtccatttcgggaaatattgcctcggatagtcgctctggtgacatgatggca
gctatacacggacaacggttgtccctactcctggcgatgttggaagtcgcttggttctca
acaacagacacggccgacgaaatccaacatttcaccgatgtcgtgcagaacctccgtgat
ataattgtcagcgatgcccagtcccctgctaaggcggtcatcggcagggtacctataccc
ttccacaagcccctactgcagatcatatacttctgtgttcgccattgtcgtgcattgatt
cgtcggccgaaggctttgaacgcccagcagcggctgatcttcgcatctaccgtggacatc
gcgttggtcttcacggttgacgctctccgatgcgtttttgaagctgccaggagccgtcta
gatctggaactggaccaggacctggagttgctcgtggcggtttttgaacagtgcacccgg
acagacatcacaccctctgctgccatgtggcttgctcgatgccaggagtcggacgtcgta
cggtgcagcatggagctcttcgttcacagcgatatcgcgggccttgcggatctggagttg
cttcgggtgcacaggaggccgttatactctcttccggtcctcatgtttcaccttgcgctt
gccagtatacccgcagccgcagaaaagctagcgagtgagggcgtgttggtagcgtacagc
aacaacagcataagctcttcaataagctcaggctctgtggaagtatcgctgccggagtta
cccggtgaacgcagccccgcacacgaagcctactgcaccatgctcgccatcgtctcggga
gtcgtcggtacgctcggccgacaacaccacttctttgacgcagaagcgagcgggctcgtt
caactctacggcggacagatatcccgcgctctgtcatggtcggtcggcgatgccctcacc
atgccacttgtcgaggagatggaacaggtcgtagaactcttctccgccatcgccgacagt
acgccgcactccgcaacctccggcaccgcggcagagaaggtgctgaaggcatttgcctca
catgcattattccttctgcagcaactcacgtatgcgttgacgcaccccaaccaacttgcg
ggcagcctggagccgataagcgcggaggagcgatccatgcttgaacaagactcgcgggac
acgtcgtcctcgacgctaatcgtcaatcctgcgagacgtccgttcctggcacgcgtgatc
catcggttatacgggctgtcgagcaccatcctcgccacattactgagcattacgcacgcg
gaagacgttctcattggcgatgaggaggattggccaatacatatggcattggcagcgccg
catacaaaggtcatcccgggcgagcctgcctctatgggtactctcctagaactgggcaac
gcctcgctcgacgtgcttcgtcacctttcgaatcaaccggtgggacaagccatctcgcct
gccgcgtcaacatcgccgctcagcaagcccctggacgtgggagacgcgatgtcgaccgcg
gcccgtaaccttgaaaacgtcctcgtcttcgcggtaacgcaatttgcgatgtggctcgcg
cggccgaacgcggacgagctcggcgaacgcgagatgcaggtggaggactttggcgggagc
gatgagcagcggtcggagagggagcgccgggcggctcggcggacctcgctaacgcttgcg
gagaggatgaggcgggggatgacgggcgagatggcgggtgatctgcaagcgctgttgggc
aaggtcaagccgctgctggagaagacaaggaccgcgcttaagacggataaggaggacgtg
gacttgacggatatactcgtcacattccttcacgatcggatgctggtggcttcgcaaagt
gtatga
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integrated database retrieval system
