Punctularia strigosozonata: PUNSTDRAFT_129422
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Entry
PUNSTDRAFT_129422 CDS
T03131
Name
(RefSeq) vacuolar protein sorting-associated protein vps13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
psq
Punctularia strigosozonata
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psq04131
]
PUNSTDRAFT_129422
Membrane trafficking [BR:
psq04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
PUNSTDRAFT_129422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
ATG2_CAD
Motif
Other DBs
NCBI-GeneID:
18878306
NCBI-ProteinID:
XP_007378667
JGI:
129422
LinkDB
All DBs
Position
Unknown
AA seq
3128 aa
AA seq
DB search
MVWWTSPAKEVLNVLFNRILAPYVENLDMNQVNYGIGQGQLTLRNLRLKKGALDKFRLPV
DVIEGHLGTFTLSLHWMNLGNQPVEVFVEDVYLLVVPSPQSSDDPEEDERRAQAAKAERI
QNAELLHMRGQAEAPEGETQQSQGLIASLIAKIVNNLQVTVKNIHVRYEDKMSVPGHPFA
AGLTLSGFSAASVNDQWQPAFIESTAGKIHKLGKLESLALYFNTDAESLEGLPHAGFVKR
FYDSIANTENHPEHQFIVKPISGEGRIVMNHKLDKDTPRFDVQLLFDEIGLALDDDQYRD
AISLVDMFHFYARQHQYKKYRPSEEEFRKNRPRALLDFAGKAILADIHDRHRRWTWAYFA
ERRDDRIAYVDLFKKKLLSQLAGMDLKRFDDLEKKLSYEDIRFYRSIARSQLRKDIASRR
KLEEEKKTQQPSTQQASSGGWTSWIWGSSQPDKPAEEQDALFGGPMTEQQRKELYSALNM
DEQDEVANSLEAPRDALKARVHAKLSKGSFTLRRDPHGNANDIISIVFDAFQADVIQRPE
NLETAVSLGGFRVFDGTTTNTLYSQIVHVQELSSNESDTDPFFFLKFENNPLDERADTAL
TVRMRNMEIIYHKGYVEAIYQFFKPPASQLESVEALLDVASQTLEGIRRDTRAGLEYALQ
THKTIDVQMDLNAPIIIIPEDITTNRCKHLVIDAGHIAIESELADKKAIREVQMKRKQQY
SDDDYRRLESLMYDKFSFKLEAAQFVLGDDLDSCRKALTSSDGDSLHLLERINIDFQVQN
SIVPKAVNLARFKVAGKLPTLQVNLSDTKYKTLMRLIDVAIPNFDNGTSAPVHVPPIMGS
TRPTLPTRHVSGGFAPLTTGLFGGAGREYNVDTDTEGDDDDDDDDQDEFFEVQQETDVKV
LELHQSIFEFNFQVKELRVNISRSDGKGSENQLAEVYLTNFVLALAVAKFDIKVGIDLQS
LAMDVVQSGQPPMKFITSAVSDTSEAKGLLSVKYTRVQKASPEYSSVYEGIDQNVDIKIS
TFIFRAAPEPVVTLYDFIMTTFVPKSGQNTPSPSGTPEEDVLVPQEDTQVQTAAQEKIRV
LVTLASVQVILINESVRLATLSLSTAQVSVMLRGPTMGITGRLGSMSLSDDSELQTALAE
FKEIMTIEGDNFADFRYQTYDPNDLDDKPGISSQVWFKAASIKVHFLEKPLHDIYLFLVK
LANLKDLYDVAAQAAVQRASEIQRMQFDVSIKSPIVVFPADAAKSPDTLVLRLGEIGAKN
QYEGLENRLAASLRGIQLVSRMHRDESESILKMIDDIDVTADLVQTNGIDRNVELEHPDS
HIVVKVSDVKLHLTQTQYRWLMALLNAIPRVLAADSDGSSQATRAADESPLLPSPAPAAE
KPSAASAPASDLQPELRPMPDDANARTWPAVDLVLSLNTVKLHLYDEFATSETTLKSHGI
SRFALNGTTLRLKMLNNGALEAQLVLHSFTMSDTRPGNFKYREIIPAAQHDRNQFMVLYT
SSGGNQGTSLAVVTSLAVVTIDAPHIIFAIDPVFALLDFFTAGLESVGETSEAEEGEEVH
ANTPTSATGLDFRVDMHDVSVSILENDTVADSQAIALSVQQLLLSQQGIMALTVERLGMS
LTRMGKPLESVRFLDDVDLTISLDNRTSSSQQMTSIEISSKPIVFRASYRDITLITNIVN
KAVALYGKSAQGRIQPQSQARSGQTARTVSQSGANRKPSVGSRAQVLMTREQLKASFDGF
RLVLIGDLHEQPMLHLRVKPFIIGAKDWSGELRATTTLATHLGYWNLTNSHWEPMIDPWT
FTISVAREGPSSGTNLTLSARERLDLNISTTLIELGLGMLNTWTKEGEFVLQKARGSYAP
YHIRNLTGSSIYIWSDIDGSQDAKDTSATKISNGESVDWRFDDWKTMREHFSSSGQNHIG
LQFVGKPWEKLRSIPVDREGEYVFALLPKMEKYTDRMLCEVKVEDNVKVVTFRSTYKIEN
ETLYPLELTMVDESGHPTHSFEKIAPGQSYALPIEAVVQNRIRLQPDQGFGYKLSPPIRW
EDLIAKKSFTIKCSHHDEREAAFRFHASVQADLNDPIARKYPKLALRLRAPIELENLLPY
NLEYRIYDKDTDQNWRSYLRKGGLMPVHSVELGHLVLLNVIVQDTGFKPSDFAIINTDGH
SDFNVESRLTLRDARDRKLDLRLNYVRPSDGGGAFKVQIYSPYLVINRTGLPFAVRSRSS
RAAQPQDVAGETSQDVLSTSAPFLLSSSSDRGHDFTFRVGESTWSKLVSFEAPSADTGLV
IASARQKSDEIHIGLSWTEGLGKYKLTKVITLRPRFTLKNNLTERISFREHGCAPRDLSE
LGPGEGVPLHFMRAARDKLLTLAFPGLNAVWCAPFNIEDIGAVHLRVQKPGQEREQLIRA
DVKISGSSIHVSFNEETNGWPFVIENGSDYSVSFYQTDSRMEADKPANFSKAYSLGPHSS
LNYAWDYPAAREKKIMLTINNAHRAVDIMEIGDLVPFRFYDRQTSKAVSLDVRADGHQQI
LSITNYDAEHSLYKPRRRSTGSLARSDTMSSGQETFEAVTEDITPTFAVNIDFAGIGLSL
MNRKMVEVVYLSINTLKFEYTTSDVAQAMTLACGTLQIDNQLHDAIFPVVLQPTPVSKES
TGVAALPTVQASLIWLNDDEHGVFFIKYCSILLQALTIEADEDFLFAVYELTQISGAWDN
AEQDKLISDSDDDVEATDAKAGKDLYFEVLELQPIKLSISFMVTGRLSGDAKLSSRNPLA
VVLNALTMTLGNVNDAALEMNALAIKDMRLTAPDLQERIVYHYRQEVLRQIYRILGSADF
IGNPVGLFTNVSSGVADIFYEPINGLVMHGNKELGIGIAKGAASFVKKTVFGVTDSMTKF
TSSLGKGLSAATLDSDYQLRRRMTQRRNKPRHAIYGVTAGAEAFATSIASGMEGVVLKPI
EGAESGGAFGFFKGVGKGLVGAVTKPVVGVFDLASNVTEGIRNTTTVFDNPARDRVRLPR
HVPADGVLVPYSEREALGQFWMKDLDNGAYRQELYVAHINLPGGDNVVLLTATRVLSFWS
KRLRLEWELPFTSVQGVTIEDTGIRFAHKAGKVHDKFVLIQDKSSRAWFFSQVATVVKAF
NVRRRMEL
NT seq
9387 nt
NT seq
+upstream
nt +downstream
nt
atggtttggtggacctcaccagcgaaagaagtcctcaatgtcctgttcaacaggattctc
gccccttatgtcgagaacctggatatgaaccaggtcaactacggcataggacaaggtcaa
ctgacgctccggaatttacgattgaagaagggcgctctagacaagttcagactcccggta
gatgtcattgaggggcatctgggcacgttcacgctttccctgcattggatgaacctcggc
aatcagcccgtggaagtctttgtcgaggatgtataccttctcgtcgttccctcaccgcaa
agcagcgatgatccggaggaggatgaacgaagagcgcaagcggccaaagccgaacgcata
cagaacgcggagctgctccatatgcgcgggcaggcagaggcgcctgaaggagaaacccag
caatcccaaggacttattgcctccttgattgcgaaaatcgtgaacaatctgcaagtgacc
gtcaagaacatccacgtccgctacgaggacaaaatgagcgtaccaggacaccccttcgcg
gctggtttgactctttcgggcttttccgcagcatctgtgaacgatcaatggcagcccgct
ttcattgagagtaccgctgggaagattcacaagctcggcaaactcgaatctttagctcta
tacttcaataccgatgccgagagcttggaagggttaccccacgcaggttttgttaagcga
ttctatgactcgatcgccaataccgaaaatcatccagagcaccaattcatcgtgaagccc
attagcggcgaaggacgaatcgttatgaaccacaagctcgacaaggatactccacggttc
gatgtgcagctcctcttcgacgagattggcctcgctttggatgacgatcagtaccgcgac
gcgatttcgttggtggacatgttccacttctatgctcgccaacatcaatacaaaaagtac
cgtccgtccgaggaggagttccggaaaaatcggcctcgagctctgctcgactttgccggc
aaagctatacttgccgatatccacgatcggcaccggcggtggacatgggcctacttcgcg
gagaggagggatgatcggatagcatatgtcgatcttttcaagaagaagcttctcagccag
ctggctggaatggatcttaaacgattcgatgatctggagaagaagctgtcgtatgaagat
atccgtttctatcggtcgatagcgaggtcacagctccggaaggatatcgcttcgcgccgg
aagcttgaagaagaaaagaagacccagcagccttcgacacaacaagcgtcgtcaggaggc
tggacgtcttggatttggggatcatctcagcctgacaagcccgctgaagaacaggacgcg
ttgttcggcggtcccatgaccgagcagcaacgcaaggagctctatagtgccttaaacatg
gacgagcaggacgaagtcgcaaactccctggaagctcctcgtgatgctcttaaggctcgt
gtccacgccaaactgagcaaaggatcatttacgttacgacgagatccacatgggaatgca
aacgatatcatttcaatcgtttttgacgctttccaagcggacgtcatacaacgaccagag
aacttggagacagccgtttccctcggaggtttccgcgtttttgacgggactacaacgaac
acactctactcgcagattgtccatgtccaggagctcagctctaacgaaagcgacacagac
ccattcttcttcctcaagttcgagaataatcctctggacgaacgtgcggacactgcgctg
actgtacgtatgcggaacatggagatcatttatcataagggatatgtggaggctatatac
cagttcttcaagcctcccgctagtcaactcgaatctgtagaagctcttcttgacgtggcg
agccagacactcgagggcattcgaagagatacccgggcaggactagagtacgcccttcag
acccacaagactatcgacgtgcagatggatttgaatgcgccgataatcatcatccctgag
gacatcacaacgaatcgatgcaagcatttggttatcgacgctggacacatagcgatagag
agcgagctggccgacaagaaggccatccgagaagtgcagatgaagcgcaagcaacaatat
tctgacgatgactatcgaagactcgagtccttgatgtatgacaagttttcattcaagctc
gaagccgcacagtttgtgctcggagacgacctcgattcgtgccggaaagcgctcacttct
agcgacggggactcgctccatcttctggaacgcatcaacatcgacttccaggtccaaaat
tccattgtaccgaaagcggtcaacctagctcgcttcaaagtcgctggcaagctgccgacg
ctgcaagtgaacctctcggacaccaagtataagacattgatgcgattgattgatgtcgct
atcccgaatttcgacaatggcacctcagcccccgtacatgttccgccgattatgggttcc
acgcgtcctacactccctactaggcacgtttcgggaggctttgctccgctaactacgggt
ctctttggaggagcgggtagggaatacaacgttgacaccgataccgaaggagatgatgac
gacgatgacgacgatcaggatgaattctttgaggtgcagcaagaaaccgacgtcaaggta
ctcgagttgcatcaatcgatatttgaattcaactttcaagtcaaggaattgcgagtcaac
atctcgcgctcagatggcaaaggaagcgagaatcagcttgctgaggtttatctgacaaat
ttcgtgctcgcgctagcggttgcgaagtttgacatcaaagtcggcatcgatcttcaatcc
ctggcaatggacgtagtgcagtccgggcaacctcccatgaaattcatcacgtcagcggtc
tcggatacatcagaggcaaagggactgctgagtgtgaagtacacccgggtacaaaaggca
tcacccgagtacagcagcgtttatgaaggcatcgatcaaaacgttgatatcaaaatctcg
acgttcatcttccgggcagcaccggaaccggtggtgactctgtatgacttcatcatgact
actttcgttcccaaatcggggcagaatactccttcacccagcggcacaccagaagaggat
gtcctggtgccacaggaggacacgcaggtacagacggctgctcaggaaaagattcgggtt
ctcgttacacttgccagtgtccaagttatcctcatcaatgagtccgtcagactggccacg
ctttctctgtcaaccgcccaggtttcggtcatgttgcgtggcccgacgatgggcatcacc
ggacgtttgggcagcatgtctctgagtgacgattctgagctacaaacagctttagctgag
ttcaaggagatcatgaccatcgagggcgataatttcgccgacttcaggtatcagacttac
gatcccaatgacctcgatgacaagcccggaatcagctcgcaagtgtggttcaaggcagcc
tctatcaaggtgcatttcttggagaagccccttcatgacatatatctgttcctcgtcaaa
ctcgcaaatctcaaggacctctacgacgtggcggcacaggctgccgttcaacgcgcttcc
gagattcagcgaatgcaattcgacgtctcgatcaagtcgcctatcgtggtcttccctgcc
gatgctgctaaatcaccagacacattagtcttgaggctgggcgagattggcgccaagaat
cagtacgagggcctggagaatcgcttggctgctagtttgcggggcatacaactagtttca
cgcatgcatcgtgatgaatcagagtctatcttgaagatgatcgacgacatcgacgtcacc
gcggatctcgttcagaccaacggtattgaccgcaatgttgagctggagcacccagactcc
cacatcgtagtcaaggtttcagacgtgaagttgcaccttacccagacgcagtaccgatgg
ttgatggccttattgaacgctatccctcgggtgctggccgcagactccgatggcagttcg
caagcgactcgggcagcggacgaatctccgcttttaccgagtccagctccagccgccgag
aagccaagtgcagcttccgcaccagcgtcggatctgcaaccggagctgaggccaatgccg
gatgatgcgaacgctcgcacttggccagcagttgaccttgttctcagtctcaatactgtc
aagctccatttatacgatgagttcgctaccagtgaaaccaccctcaagtctcatggaatc
tcgcgcttcgcgttgaatggcaccactttacgactgaagatgctgaacaacggtgccttg
gaggcacagcttgtcttgcactcgttcaccatgagcgatactcgtccaggcaatttcaag
tatcgcgaaattatccccgccgctcagcatgatcgaaatcagttcatggtattgtatacc
agttctggcggcaaccagggcacatcccttgctgtggtcacatcccttgctgtggtcacc
atcgacgcccctcacatcatattcgccatcgatcccgtgttcgcgcttctcgatttcttc
acggctggtttagaatcggtcggcgagacatctgaagcagaggagggggaggaagttcac
gccaacactccgacatcagccacaggactcgacttccgggttgacatgcatgacgtgtcg
gtcagtatactcgagaacgacacggtcgcggatagccaagcaatcgccttgtcagtgcaa
caacttctactgtctcaacagggaataatggcattgacggtagaacgtctcgggatgtcc
cttacgcgtatggggaagccactcgaaagtgttcgattcctggatgacgtagacttgacc
atatccttggacaaccggacgtcgtcttctcagcagatgactagcatcgagatctcctct
aagcccatcgtcttcagagcatcgtatcgtgacatcacactcatcacaaatattgtcaat
aaggccgttgctttatatggcaagtccgctcaaggtcgaattcagccgcaatctcaggcg
cgttcaggccagacggccaggacagtttctcagtcaggcgcgaaccgcaagccaagcgtc
ggcagccgagcacaggttctgatgacaagggagcagctcaaggcatcgtttgacgggttc
cgcctggtcctcatcggagacctgcacgagcagccgatgctccatctcagggtcaagccg
ttcatcatcggagccaaggactggtcgggagagctcagagccaccacaactctggcaacc
cacctgggatactggaatttgaccaactcgcactgggaaccaatgattgacccatggacg
ttcacaatttcggttgctagagaaggcccaagctccggcacaaacttgacactctctgca
cgagagcggttagatctgaatatcagcacgaccttgatcgagctggggctaggtatgctc
aacacgtggactaaggaaggcgaatttgtcttgcagaaggcccgtgggagctatgctccg
taccacatacgcaatctcacaggatcctccatctatatctggtctgacatcgacggaagc
caggatgcgaaggacaccagcgcaactaagatcagcaatggagagagcgtcgattggcgt
tttgacgattggaagactatgcgcgagcatttctcgtcatcaggccaaaatcatattggg
ctgcagttcgtcggcaagccttgggagaagttgcggagcattccagtggatcgcgaaggg
gaatatgtctttgcgttgctcccgaagatggagaagtacacggaccggatgctttgcgaa
gtcaaggtcgaggataatgtgaaggtcgtcacgttccgatccacttataagattgagaac
gagacattgtacccattggagttgactatggtggacgagagtggacatccaacacactcc
ttcgagaagattgctcccggacagtcgtacgcccttcccatcgaagctgttgtacagaac
cgcatcagacttcaacccgaccagggtttcggctacaaattgtccccgccaatcaggtgg
gaggacctgattgctaagaaaagcttcacgatcaagtgttctcaccatgacgaacgcgag
gccgctttccgtttccatgcttcagtgcaagctgatcttaacgatcctatcgcaaggaaa
tatccgaagcttgcattacggttgcgtgcgccgatagaactcgagaacctcttgccgtac
aatttggagtatcggatctatgacaaggacacggatcagaactggcgtagttacttgcgg
aaaggaggcttgatgccggttcattccgttgaactggggcacctcgtcctcctgaacgtc
attgtccaggacactggattcaaaccgagcgattttgccatcatcaacaccgacgggcat
tccgacttcaatgttgaaagtcgcctcacgttgagagacgcccgagataggaagctggat
ctgcgactcaattatgtacgaccatccgacggtggcggcgcgttcaaagtccagatctat
agcccatatctcgtcatcaaccgcactgggttacctttcgccgtacgctcgcggtcatcg
cgagccgctcaacctcaggacgtggcgggcgaaaccagtcaagacgtcttgagtacttcg
gcaccattcttattgtcgtcttccagcgatcgaggtcatgacttcaccttcagggttgga
gaatcgacgtggtccaagctcgtgagcttcgaggctccatcggccgatacggggcttgtc
attgcatcggctagacaaaaatcggatgagatacacattggtctctcttggaccgaaggc
ttagggaagtacaagctgacgaaagtgataacgctccgtcctcgattcaccctcaagaat
aacctcactgaaaggatcagcttccgtgagcatggatgtgctccccgtgatctctcggaa
ttgggtccgggagagggagtaccattgcatttcatgcgtgcagcgcgcgataagctcctt
actcttgccttccctggactcaatgctgtgtggtgtgcgccgttcaacatcgaggatatc
ggggccgtacacctccgcgttcaaaaaccaggccaggagcgagagcagctcatccgcgcg
gacgtaaaaattagtggttcctccattcatgtgtcattcaacgaagaaaccaacggctgg
ccatttgtaattgagaacgggagcgattacagcgtgtcattctatcaaacagactcgcga
atggaagccgacaagccggccaacttcagcaaagcgtatagtctcggaccacattcctcg
ttgaattacgcatgggactaccctgctgcgcgagagaagaagatcatgctgacgatcaac
aatgctcaccgcgctgtggatatcatggaaatcggtgaccttgtccccttcaggttttat
gatcggcaaacgtcaaaagctgtctcacttgatgttagggccgacgggcatcagcagatc
ctgagcatcaccaactatgatgccgagcatagcttatacaagcctcgccgaagaagtaca
ggatcgcttgcgaggtcggacacgatgtcaagtggccaagaaacattcgaggccgtaacc
gaagacatcacgccgacgttcgccgtcaatatcgacttcgctgggattggattgtccctt
atgaacagaaagatggttgaagtggtttatctttccatcaataccctgaagttcgagtat
accaccagcgatgttgcgcaggctatgaccctcgcttgtggcaccctgcagatcgacaac
cagctccacgacgctattttccctgtggtacttcagccgacacctgtatccaaagagtcc
acaggcgtagcggcgttgcctaccgtgcaagcctcgttgatctggctgaatgatgatgaa
cacggagttttcttcatcaaatattgttcaatattactgcaagctttgaccatcgaggcc
gatgaagacttcttgttcgccgtctacgagctgacgcaaatctctggtgcctgggacaac
gcagaacaagacaaactcatctccgactccgacgatgatgtcgaggctactgatgcgaag
gctggcaaggacctttatttcgaagtgctcgagttgcagcccatcaaattgtctatatcc
ttcatggttactggacgactcagtggtgatgcgaaactgagttctcggaaccctctcgcc
gtagttctgaatgctcttacgatgacgctgggcaacgtcaacgatgccgcattggagatg
aatgcgttagctatcaaggacatgcggctcaccgcgcctgatttgcaagagcggatcgtg
taccattaccgtcaggaggtcctccgtcagatttatcgcattttggggtctgcggacttc
ataggaaatcctgtcgggctattcactaacgttagctccggcgtggcggatatattctac
gagcctatcaatggtctcgtcatgcatggcaataaggagcttggcataggtatcgcgaag
ggtgccgcaagctttgtgaagaaaacggtgtttggggtgaccgatagtatgaccaagttc
acgagcagccttggcaagggtctctctgctgcgacgctggactcggactatcagctgcgg
agaagaatgacgcaaaggcggaacaaacctcggcatgccatttacggcgtaaccgccggc
gctgaagcgtttgctacgagtattgccagtggcatggaaggtgttgtgctaaaaccgatc
gaaggggcggagtcaggtggggcatttggctttttcaagggcgtcggcaaaggcctcgtg
ggcgccgtgaccaagcctgtagtcggtgtattcgatctcgcttccaacgtcacagaaggt
atccgcaacacgacgacggtcttcgacaatccagcaagggatcgtgtgcggcttcctcgg
catgttcctgcggacggcgtgctcgtcccatactctgagcgtgaagcactaggacaattc
tggatgaaagacctagacaacggagcataccgccaggaactctacgtcgcacatatcaac
ttaccgggaggcgataacgtggtactgttgaccgccacgcgcgtactctccttctggtcc
aagcgcctacgccttgaatgggaattaccattcacctcggtgcaaggagtgactatcgaa
gacacgggtatacggttcgcccataaggctggcaaagttcacgacaagtttgtcctcatc
caggacaagtcgtcgcgggcgtggttcttctctcaagtggccacggttgtcaaagctttc
aacgttcgcaggcgtatggagttatga
DBGET
integrated database retrieval system
