Punctularia strigosozonata: PUNSTDRAFT_133359
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Entry
PUNSTDRAFT_133359 CDS
T03131
Name
(RefSeq) TFP11-domain-containing protein
KO
K13103
tuftelin-interacting protein 11
Organism
psq
Punctularia strigosozonata
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psq03041
]
PUNSTDRAFT_133359
Spliceosome [BR:
psq03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PUNSTDRAFT_133359
Other components
Complex C specific factors
PUNSTDRAFT_133359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Geminin
Motif
Other DBs
NCBI-GeneID:
18878935
NCBI-ProteinID:
XP_007382841
JGI:
133359
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MARRKRQFLSDGDSDSSPASDDDAEASFDTQNPDARAERELFENPYGHKRRRKDEREDAI
YGVFGDDSEEEAEGFRGRGGRGRGGGGAKRSDWTKAPAFVGGQKVEPSKTTEVPDVVDED
AVMEDGSDADSEEDDDEDDADQDEPPMIVEDDYGQDELEEQQPRIGGIGSGKSKAGLGMS
AFSRGGIGSRSAAADDSGDLTGPGKRTGGIGFSRGSSSLAGFSKGDIGSSTSSFTPAETD
SKPAHKGSIGSNSFSQGAGVAATFTSASAYPSASPAPATHADSAPTIDVDTADLPASFGS
APRTQRAFVRTSNPASGSATPAPLDAKEQAHFASLQGSFGARMLAKMGWQAGTGLGATGT
GIVTPVESKLRPKGMGIAFKGFREKTEQSKMEAKRRGETVSDEEEEGGKGRRARKGGKKE
TEKEKRAEAWKRPRKVKTRVEHKTYEEIVAEAGEQAAPAGVGVIIDATGATPREVASLAD
VSRSSWTPSTDPTRLPELRHNLRLIVESAKGDLDGLAREAKALEERKKWVRAEEARLAKK
VQDEAELIKRLQEISLVANDISSQAKELASAYEPSLDVFSPNFEKLYGQYTKECERYRLD
EIVVAAIAPAFRRMLASWNPLEDPSAFVNTFWPWRGILKIAMSEDKPETQIDVFGTRTVN
TAPLVEKPMTPFESLLWNAWLPKIRSVTNNEWLPENPAPLVRLYETWSTLLPPFIRDNFF
DQLVLPKVQKAVAEWNPKKAGKDGVPLQRLVFPWLPHLGLRMEDLLGDARRKVKSLLRAW
KPEDGLPEELLAWKDVFDVAEWDNMMLKYVVPKLGATLRDDFRVNPRAQDMEPLQRVLAW
SSVLRPSIFSSLLESTFFPKWLEVLHFWLVQPGASYEEIAQWYSFWKSTFPEPVQRLPGV
ARGFTQAQQLMNEAIVLGPEGRARLPRPELTAASAPASRQATPKPAAQRPVAGRTQEITF
RSIVEEHAAAHNLLFIPTGRAHEKSRMPLYRVSQTADGKKGLLVYIDDDAVWAPDGEDYR
AISLEEMVLRATKTSSS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcaagcgccaattcctatcggatggcgattccgactcgtccccggcgtcc
gacgacgacgctgaggcttccttcgacacgcaaaacccggacgcgcgggctgagcgcgag
ctattcgagaatccgtacgggcacaaacgacgacgaaaggacgagcgggaggacgcgata
tatggtgtgtttggtgatgacagcgaggaggaggcggaggggtttagagggcgcggtggg
agggggcggggaggtggtggggcaaagaggagtgactggacgaaggcgccggcgttcgta
ggtggtcagaaagtcgagccgagtaagacgaccgaggtgccggacgtggtagacgaggat
gctgtcatggaggatgggagcgacgcggacagcgaggaggacgacgatgaggatgatgcg
gatcaagatgagcctcccatgatcgtggaggacgattatgggcaggacgagctcgaggaa
caacaaccacgcattggtggcatcggctcaggcaaatccaaagccggccttggcatgtct
gccttcagccggggcggtataggctctcgaagtgcggctgcagacgactcgggcgacctt
actgggcctggaaaacggacaggcggcatcgggttttccagaggctcttcaagccttgcg
ggtttcagcaagggtgacatagggtccagcacttcttcattcacgcccgcagagaccgat
tctaaaccagcacacaaaggaagcattggctccaactccttcagccaaggcgccggtgtt
gcggccacattcacatccgcatctgcctatccctctgcctcccctgccccagccacccat
gcagattccgcccccaccatcgacgtcgacactgccgacctacccgcctccttcggttcg
gccccccgtactcaacgcgcgtttgtgcgcacctcgaaccccgcctcgggtagtgctacc
cctgcgcccctcgatgcaaaggagcaggcacactttgcctcgctgcagggctcgttcggc
gcgcggatgctcgcaaagatgggctggcaggcgggtaccggcctgggcgccacgggcacc
ggtatagtcacgcccgtcgagagcaagctgcgtccgaaggggatgggtatcgcgtttaaa
ggcttccgggagaagacggagcagagcaagatggaggcgaagcgacgtggcgagacggtg
agcgatgaggaggaggaagggggtaagggacggcgcgcacggaaaggcgggaagaaggag
acggagaaggagaagcgggcggaagcatggaagcgaccgaggaaggtcaagacccgggtt
gagcacaagacgtacgaggagatcgtcgcggaggcgggcgaacaggcagcgcctgcgggc
gtgggcgtcatcatcgatgctactggcgcaacacctcgagaagttgcatcactggccgac
gtatccagatcgtcatggacgccatcgaccgacccgacgcgccttcccgaattacgacat
aacttacggctgattgtcgaatcggccaaaggtgacctcgacggtctcgcgcgtgaagcc
aaagcgctcgaggagcggaagaaatgggttcgcgccgaggaagcgcgcctagcgaagaaa
gtccaggacgaagcggagctcatcaaacggctgcaggagatcagccttgtcgcgaacgac
atcagttcgcaggcgaaggaacttgcgtcagcgtacgaaccttccctcgacgtcttttcg
cccaactttgagaaactgtatggacagtacacaaaggaatgcgagcgttatcgcctggac
gagatcgtggtcgctgctatcgcccccgcattccggcgcatgcttgcgtcgtggaatccg
ctcgaagacccgtctgcgttcgtgaacacgttctggccatggagaggcatactcaagatc
gcgatgagcgaagacaagcccgagacgcagatcgacgtctttggtaccaggacggtcaat
accgcgcccctagtcgaaaagccgatgacgccattcgaatccctcctttggaacgcgtgg
ctacccaaaatacgctccgtcacaaacaacgaatggttacctgagaaccctgcgccgctc
gtgcgcctctacgaaacgtggtcgaccctcctcccgcccttcattcgcgacaacttcttt
gaccagctcgtcctccccaaggttcagaaggcagtcgctgagtggaatccgaagaaggcc
ggaaaagacggagtgccactgcagcggctagtgttcccgtggttgccgcacctaggactc
aggatggaggacctgctcggcgacgcgaggcggaaggtgaagagcctgctgagggcgtgg
aaaccggaagacggcctgccggaggaactactcgcctggaaagacgtcttcgacgtcgcc
gaatgggacaacatgatgctcaagtatgtcgtgcccaagctcggcgctaccctgcgcgac
gacttccgcgtcaatccccgggcgcaggacatggagccgctccagcgcgtgctcgcctgg
tcctccgtcctccgcccctccatcttctcctccctgctcgagtccaccttcttccccaag
tggctcgaggtcctccacttctggctggtccagcccggcgcgtcctacgaggagatcgcg
cagtggtactcgttctggaagagcacgttccccgaacccgtgcagcgactgcccggcgtc
gcgcgtgggttcacgcaggcgcagcagctgatgaacgaggcgatcgtgctggggcccgaa
ggccgcgcacggctgccgcgccccgagctcacggccgcgtccgcgcctgcttcgcgccaa
gcgactcccaaacccgccgcgcagcgcccggtcgctggccggacacaggagatcaccttc
cggtcgatcgtggaggagcacgccgcggcgcacaacctgctgttcatccccaccggccgc
gcgcacgagaagtcgcgcatgccgctgtaccgggtttcgcagaccgcggacgggaagaaa
gggttgttggtgtacatcgacgacgatgccgtgtgggcccccgatggcgaggattatcgc
gcgatcagtctggaagagatggtgctaagggcaacgaaaacgagctctagttga
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