Punctularia strigosozonata: PUNSTDRAFT_137420
Help
Entry
PUNSTDRAFT_137420 CDS
T03131
Name
(RefSeq) hypothetical protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
psq
Punctularia strigosozonata
Pathway
psq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PUNSTDRAFT_137420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psq03009
]
PUNSTDRAFT_137420
Ribosome biogenesis [BR:
psq03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PUNSTDRAFT_137420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
HEAT_HEATR1
U3snoRNP10
HEAT_GCN1
Gasdermin_C
ARM_ARMC5
Rer1
Motif
Other DBs
NCBI-GeneID:
18879803
NCBI-ProteinID:
XP_007387124
JGI:
137420
LinkDB
All DBs
Position
Unknown
AA seq
2072 aa
AA seq
DB search
MVSSLAAQLAQGASLNSSLLVDRSRRGPTQSYLFTGRSADEHDLDSIYALGCNGLLQLGR
LNSAFTAFADTLFSDQAKTTDRTLQTKAQNEELDNLIAEFLQCLGPWLLEAPAGKVLEWL
VRRFRIHEFNVESVIALFLPYHESPHFAKMVTILHIRDHPTWRFLQPFAKAGKSLPRTAL
VTEMLKSPELTRSAVSLLPAALRAQHVHRTLVAFTAGTLLEYISRSEGLSEGVLAMLIPA
FLAPLEKDVLSRGEEGGRPAMLIREAILGSYVLLAALSQRSTLTPAALKTALERMAAAAT
SGHVEASQFINAAVAVCAPQEELETLKLPLSAEISDAAIKALAYHGSDKLLGPVLNRALS
PSKETLSVEIAYLVEKLFTASNPPSSLIRRITALLLARAIRSKNRHDAERALLATVQQRH
LEVFKSACDEYLTRTEEEDDEDHTALRNEVDQLLISLSLPPAASGSKHALADPDMILASA
HADASVRLAAVRKLIGTLIENSSSTDEAELQSIRSALLQRVHDTDPSVVGELYAHPELIL
PSIAEEENDEFLATLAAHLESSGSRQLIRLHLTFVAAHSSASSSAGSTFDSNAAVLRLFF
PFLIFSKPRQKSAAAAWDVVQAHEGIADSALLKGCVDVLKKSGEITGEIAMREANASIAE
KLAENLIALNSYEQVIGEVIARLHESSTSPNGPHARILAYLVLRSLLSRLSSEQQVEMAH
RALDAIDLQSLDAFAESLARTQSSEDPLGDDALNHAIVTKPTSPNTLRRLQASLFAFLPQ
IHKPESNALPWLAQSGDDHGLRYVQLMRRLYALANATGTVPLLSATINRNLFVALATDSL
AFLAGIWIRRDGTDSIRKIALAHAVAFLAAHTDMPKPVDFQTVLPCLLVGLQSGDRPMRE
GAMSCVVVLAQLATAQQASAVYALDTIYGSHSAGLQYVEWEDSRRYLAALVERQDHLVSD
SSQLRVFHRELLSRSKSDSKKDGGYKQRMLCYLLSHVSNAPAMDVRLPILRSLQDVKHVV
KFQMLMPVVQRQIDFVEAHSEVANGEGDAGFDEFMTLCAASVGGPAARDCNEPSSQQWPL
FGKALQWSFGPGINICPNMRKAMTDNLRDHLFAALNNERKMELCSVLLEIGSQGGDVRNE
CLGALSHLLNDVPVIVKLLTTVQPASDAHANRSAKRAKLDGVVEEDSLQSLALLAEALNN
KTLPASFDLVSALLDTLSSVVHSDATLQLQRGYVAQLLMSALDNVTSRLVELPNIEPSPI
RASILVDVIRITDNPQTFHQALLLMATLARLAPDAVVQNIMPIFIFMGSNVFHRDDPYSF
RVVQKTIDSIVPVMMATLRTSHEQKRDLWIAARSFLQLFTDAVNHVPRHRRLGFYSHLVD
VLGAEEFLSPVTMLLVDKVASRVARQSREEARQSLIIPLALLHRSSRALQITSFLDFLDE
AYDSLLTAFDMTPERNVFLSASPDPDEDHPSRSKQLLRRAHALLVLVAESFKLAKEPFVG
PASEDAGVTIGSVVPKLLRTYSLSPSGREMDTAIVGLHRTARVCLEEALQKMAVPDFARA
TLHMLRSGDDQIKVAALTLLIDRLHLVTEDARQLIAPVIAQIVDVIVEITSTSKSENLIQ
AAFKSLKEISNTMCAGEEASLMQGIPPVLAAMRTRSDAAAAVSVLPSLCVALGPRVIPHF
RAVVQECIALVRESFRDMESSSAVHDCLDVLKKLLSSIPSFWGSADIAMLVSLYMDYSVA
PGSQSSPVEGVIRALAKRAPSDLLLTTLCEMWPSGGLKDVRKYLAYFECMKRALRIAQRT
VVSEHIRQLFKVFMAAFDLRHDVESESIEEAEHRAIEAFVELTSKLNDISFKPLFRRLYD
WSFTNSNLSARQVTFCRTFMALLEYFKALMTPYMSFLLQPFIEKLLAYSSGSERDRTLWT
SVIQVLVRSLAFDDGGKWNRMTPFWRDDKLRALVSPLVNQLAVCINLNIAEGRDLLSTCL
TAVVDATTDDDLLKSINLKVLMHTRSEEVKLRILALNCSTTLWAEHGGKLLGLATETATF
IAECAEDESDNVVKAAIELKDAVESVAGSIQV
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atggtctctagccttgccgcgcagctcgcgcaaggggcctcgctcaattcttctctcctg
gttgaccgctcacgacgcggacctactcaatcctatctcttcacgggccgcagcgcggac
gaacacgacttggactctatatatgccctcggatgcaatggactactgcagctcggtcgc
ctcaactccgcattcacggcgttcgcggatactctgttttctgaccaggcgaagacgacg
gacaggacgctgcagacgaaggcgcagaacgaggaactggacaacttgatcgcggagttt
ctacagtgcttgggtccgtggctgctcgaggccccggcaggaaaagtgttggagtggctc
gtgaggcggttcagaattcacgagttcaacgttgaatccgtcattgccctattcctccca
taccacgaatcgcctcacttcgcgaagatggttactatccttcacatccgcgaccacccc
acatggcgcttccttcagcccttcgcgaaagcgggaaagtcactccctcggaccgccctc
gtcaccgagatgctcaaatcgcccgagcttacgcggtctgccgtctctctcctccccgcc
gcgcttcgcgctcaacacgtccaccgtaccctcgttgcattcacggccggcacgctgctc
gagtacatctcacgctcggagggcttgtccgagggcgtgctcgcgatgctcatacccgct
ttcctagcgccgttggagaaggacgtgctctcaaggggcgaagaaggtggcaggcctgca
atgttgatcagagaggctattctcgggagttatgtcctgctggccgctctcagtcaaaga
agcaccctcactccggctgcacttaaaaccgctctcgagcgcatggctgcggctgcgact
tcgggccatgttgaggctagtcagttcataaacgcggccgtggcggtatgcgcgccgcaa
gaggaactggagacgttgaagctgcccttgtctgcggagatttcggacgccgctatcaag
gcgctcgcgtatcacggctcggacaagctcctaggtcctgtgttaaatagggcactctcg
ccatcaaaggaaacgctctccgtagagatcgcatatctcgtcgagaagctcttcacggcg
tccaacccgccaagttctctcattcgccgcatcactgccctgctactcgcgagagcgatc
cgaagcaaaaatcgacatgacgcggagcgcgcactgctcgcaacggttcaacaacggcat
ctcgaggtgttcaaaagcgcttgtgacgagtacctaacccgtaccgaggaagaagacgac
gaagaccacactgccttgaggaatgaagtggatcaacttctaatctccctgtcgctgccg
ccggcagcctccgggagtaaacacgcccttgccgatccggacatgatcctcgcttccgca
cacgcagacgcgtccgtccgtctcgccgccgtccggaagctcatcggcacgctcatcgaa
aattcctccagtacagacgaggcagagctgcaatctatccgctcagcgctcctccagcgc
gtccatgacaccgacccctccgtcgtcggcgagttatacgcccatcccgagctcatcctc
cccagcatcgcggaagaggaaaacgacgaattcctcgcgactctcgccgcgcacctcgag
tcgagcggttcgcgccaactcattaggttgcaccttaccttcgtcgccgcccactccagc
gcgtcatcgtctgccgggtccacgttcgactctaacgccgcagtgctgcgcctattcttc
cccttcctgatattctctaagccgagacagaagagcgcagccgcggcttgggatgttgtc
caggctcatgaaggtatcgccgactcggcgctactgaagggctgtgtcgacgtcttgaaa
aaatcgggcgaaataaccggggagatcgcgatgcgcgaagccaacgcctccatcgcggag
aagctagcagagaacctcatcgcgttgaacagctacgaacaggttataggggaggttata
gcccgtctgcacgagtcttccacatcacccaatggcccgcacgcgcgcatccttgcgtac
ctcgtgttacgatccttgctcagtcgactttccagcgagcagcaagtcgagatggcacat
cgagctttggacgccatcgatttgcagtcgctggacgcgttcgccgaatcgctggccaga
acacaaagttcggaagacccactaggtgatgacgcgctcaatcacgccattgtaacgaag
ccaaccagtccgaacacgctccgtcgcctacaggcgtccttgttcgccttcttgccacaa
atccataaaccagagagcaatgcgcttccttggctcgctcagtctggagatgaccacggt
cttcgttacgtccaactcatgcgtaggttgtacgccctggccaacgccactggcacggtg
ccgcttctctctgcgacgatcaaccgcaacctcttcgtggcgctggccacggactcgctc
gcattcctcgccggcatctggattcgccgagacggaacggatagcatccgtaagatcgcg
ctagcgcacgctgtcgccttcctcgctgcacacacggatatgccgaagccggtcgacttc
cagacagtgcttccgtgtctgttggtcgggctgcaaagtggggatagaccgatgcgcgag
ggcgcgatgtcgtgcgtcgttgttttggcgcagctggccacggcgcagcaggcgtccgcg
gtttatgcgctggatacgatctatgggagccactccgccgggttgcagtacgtggaatgg
gaagattcgcgcaggtacttggcagcccttgtcgaacgtcaggaccatctggtcagcgac
agctctcaattgcgtgtcttccatcgcgagcttctgagccgaagcaagtccgactcgaaa
aaggacggcgggtataagcagcgcatgttgtgctatctactttcacacgttagcaacgcg
ccggcgatggatgtgcgcctgcctatcctcagatcattgcaggacgtcaagcacgtggtc
aagttccagatgctcatgccggtcgtgcaacgtcagatcgacttcgtcgaagctcactcc
gaagtggcaaacggagaaggcgacgccgggttcgacgaattcatgacattgtgtgcggca
tcagtaggcggtcctgcagcgcgagattgcaatgagccatcttcgcagcagtggcctttg
tttgggaaggcactgcaatggtcattcggtcccggcatcaacatatgccccaacatgcgt
aaagcgatgacggacaacctgcgtgaccatcttttcgccgctctgaacaacgaacgcaag
atggagttgtgctcagtcctattggaaatcggaagccaaggaggagacgtccgtaacgag
tgtctcggtgcgctatcgcacttgttgaacgatgtccccgtcatcgtcaagctgttgacg
accgttcaacccgcgtccgacgctcatgcgaaccgtagcgcgaaacgagccaaattggat
ggcgtcgtggaagaggatagcctccagtctttggccttacttgcagaggctctcaataac
aagactctcccggcatcattcgaccttgtgtcagctttgttggatactttgtccagtgtg
gttcattccgatgctacgttgcagctgcagagaggttacgtggctcaactgttgatgtct
gcccttgacaacgtcacgtcgcgtctcgtggaattaccgaatattgagcctagccccatc
cgtgcgagcatcctggtggatgttattcgaattaccgacaatccacaaactttccaccag
gccttgctgctcatggcaaccttggcccgcctggctccggacgctgtcgtgcaaaatatt
atgcccatattcatattcatgggctcaaacgttttccaccgtgacgatccctatagtttc
cgcgtggtgcagaagactatcgacagcatcgttccagtcatgatggctacgctgaggact
tcacacgaacaaaaacgggacttatggatagctgccaggagcttcctgcaactgttcacc
gacgcggtgaaccacgtacctcgtcatcgccgccttggattttactctcatcttgtcgac
gttttgggggcagaagagttcctgtccccagtcaccatgcttctcgtggacaaggtggca
agcagagtagctaggcaaagtagggaagaagcgcggcaatcgctcattattcctcttgca
ctgcttcatcgatccagtcgcgcgctgcagatcacgtcgttcttagatttcctcgacgaa
gcttacgactctcttcttactgcttttgacatgacaccagagcggaacgtatttctgtct
gcctctccggatcccgacgaagaccacccatcgcgatccaagcagctattgcgacgcgcg
cacgctctccttgttcttgttgcggaaagcttcaagctggcaaaagagccatttgtcggc
cctgcctccgaggacgcaggggtaactattggctcagtggtccccaagcttttacgtaca
tattcgctatcaccttctggacgggagatggacaccgccatagttggtctccaccgtact
gcacgtgtgtgtctcgaggaagcgttgcaaaagatggcagttccagacttcgctcgagcg
acgctgcatatgctccgatccggagacgatcagatcaaagtcgccgcgcttactttgctc
atcgaccgtctgcatctggtcaccgaggatgcacgacaacttattgcccctgtgattgcg
cagatagtggacgtcattgtcgaaatcacttcaacctcaaaaagtgagaacctgatccag
gcagccttcaaaagcttgaaggaaattagcaacacgatgtgcgctggcgaagaagcatcc
ttgatgcagggaattcctcctgttctcgccgccatgcggacccgcagtgacgccgcagca
gcagtttctgtgttaccttccttatgcgtggctttgggcccacgggtcataccgcacttc
cgggcagttgttcaggaatgcatcgcgcttgtgcgcgaaagcttccgggatatggagtcg
tcttctgcagtgcatgactgcctcgatgtgctgaagaaacttctttcttctattccttcg
ttctggggaagcgcagatattgccatgctggtgtcgctatacatggattattccgtcgct
ccagggagccaatcttcacctgtagagggagtcatacgtgcacttgcaaaacgtgcacct
tcagatctgctactgaccacgctctgcgagatgtggccctccggcggtctaaaggatgtt
cgcaaatatctggcgtacttcgaatgtatgaaacgtgctcttcgcatcgcacagcgcact
gtggtatccgaacacatccggcagttgttcaaggtcttcatggcggccttcgaccttcgg
cacgatgttgaatccgaatccatcgaggaggccgagcatcgtgcaattgaggccttcgtt
gaattgacgtcgaagctgaacgatatctcattcaagccactcttccggcgcctatacgat
tggtcgttcactaacagcaacctatccgcacgtcaagtcacattctgccgcacattcatg
gcgttgttagaatacttcaaggctctaatgacaccctacatgtcattcttgttgcaaccc
ttcatcgagaaactacttgcatactcttctgggtccgaacgggatagaaccctgtggaca
tctgttatccaggtcctggtcaggagtcttgcatttgatgacggaggcaagtggaaccgg
atgaccccattctggagagatgacaaattgcgtgctctcgtctccccgctcgtgaatcag
ctcgcggtttgcatcaacctgaacatcgcggaaggacgtgatctgctttcaacctgcctc
acagctgtagttgacgccactaccgacgacgatttgctcaagagtatcaacctgaaggta
ttaatgcatacacgctcggaagaagtcaagctgcggattcttgccctcaattgctccacg
actctgtgggcggagcatggaggcaaactcctcggtcttgcgacagaaacagcgacattt
attgccgagtgcgcggaggacgagtccgacaatgtagtcaaggctgcgatagagctgaag
gatgctgtggagagtgtcgcgggaagcatacaggtgtaa
DBGET
integrated database retrieval system