Punctularia strigosozonata: PUNSTDRAFT_138855
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Entry
PUNSTDRAFT_138855 CDS
T03131
Name
(RefSeq) ribosomal protein S5 domain 2-like protein
KO
K12589
exosome complex component RRP42
Organism
psq
Punctularia strigosozonata
Pathway
psq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PUNSTDRAFT_138855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_138855
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PUNSTDRAFT_138855
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
PUNSTDRAFT_138855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
18880177
NCBI-ProteinID:
XP_007388596
JGI:
138855
UniProt:
R7S172
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MTVLLSKAEKSYIQASLQADPSLRGDGRGLLDFRALALETGVSPLTNGSARVRIGTGDGG
TEVLAAVKLEVEDVGKDDGVDGGRLNCSVTCLPSAYPHLAPTALDELSADLSALLHTTLA
HPSLLPSNLTIIPNKKSWVAHLDCVLRSDGGNALDALFVAARAALWDTKVPRTRSVEYKA
HGRGAGAGAAKGDDTAAMDVEGAAAGENEDASGFDTRQILRATDFELPDYWDEGEPLGNR
ERWPVCVTLNVLPPLYYLDATAPEEVSTPLRLVLLFSFPATPAEPVLQGMRLLGAGETDL
SLISKLISEGRKHAQELHAALEVKLRDEDLRRNEKARLRFSTR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacttctctccaaggccgaaaaatcctacattcaagcgtcccttcaagcagac
ccatccctgcgcggggatggccgtggtttgctcgacttccgggcgctcgcgctcgagacg
ggcgtgtcgcccttgacgaacggatctgcgcgcgtgaggataggcaccggcgacggcggg
actgaggtgctagcagcggtgaagctggaggtggaagacgtgggcaaagatgacggcgtc
gacggcggcaggctgaattgttccgttacgtgcctgccctcggcctacccccaccttgcc
ccgaccgcgctggacgagctctccgccgacctcagcgccctcctccacaccacgctcgcg
cacccctccctccttccttctaacctcactatcatcccgaacaaaaaatcttgggtcgct
cacctcgactgcgtcctccggagcgacggcggcaacgcgctcgacgcgctcttcgtcgct
gcccgtgccgcgctgtgggacacgaaggtgccgcggacgcggagcgtagagtacaaagcc
cacggacgtggtgcgggcgcgggagcggccaagggagatgatacggcagcgatggacgtg
gaaggtgcggcagcgggagagaacgaggacgcgagcgggttcgacacccgccagatcttg
cgcgcgacggatttcgagctgccggactactgggacgagggcgagccgctcgggaaccgc
gaacggtggcccgtctgcgtcacgctcaacgtcctcccgccgctatactatctcgacgcg
accgcgcccgaggaggtgtccaccccgcttcgcctcgtgctcctcttctccttccccgcg
acgccggccgagcccgtgttgcagggtatgcgcctcctcggcgccggcgaaacggatctc
agccttatctcaaaactcatctctgagggacggaaacacgcgcaagagctgcatgcggcg
ctcgaggtgaagcttcgagacgaagacttaaggcggaatgagaaagcgcggctacggttc
tcgactagatga
DBGET
integrated database retrieval system
