KEGG   Punctularia strigosozonata: PUNSTDRAFT_140326
Entry
PUNSTDRAFT_140326 CDS       T03131                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
psq  Punctularia strigosozonata
Pathway
psq03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PUNSTDRAFT_140326
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psq03009]
    PUNSTDRAFT_140326
Ribosome biogenesis [BR:psq03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PUNSTDRAFT_140326
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Utp13 WDR55 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st PEP5_VPS11_N WD40_like Beta-prop_IP5PC_F WD_LRWD1 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Pox_TAP
Other DBs
NCBI-GeneID: 18880538
NCBI-ProteinID: XP_007378807
JGI: 140326
LinkDB
Position
Unknown
AA seq 923 aa
MAVPVRPKLKTAFKKARVVAPLYTGGPVAVAGDGSKLFSCVAEDVVMTDIASGTEMCRFA
GDTESVTALAVSPSSNHLIMFTSSLSLRVYEVPEATADTSKPIRPVRVVSRAHDAPVHVC
KVDPTSSYVASGSADGVVKVWDVRRGYTTHIFKGHGGVVSALTFSYPRDPSAVTLPKMHL
ITASVDTRIRIFDLSASVSRNGSFKAEHILEGHVSVPRGLDVTADGKWLVSGGRDSVVLL
WDLSSLAGNSNKPKSSKAKGKEKAMVPALMKTIPALERVEAVGLLAPSEELGGTSTGTDK
IRFYTGGEKGVIKIWDGQSGSVMHTFGSESELASDEEQEEQRQIVNAIYVPATSTIVSIH
ADQNILFHSLSTKALTRQLIGYNDEIVDATFLSASANDPSGVDSHIALATNSSLIRVYST
SQSDARLLEGHSDIVLSLDHSARGDVLASGSKDRTARLWRPAQYNREKAGEWGWRCVAIC
EGHAESVGAVALPRKSDEERPRFLFTGSQDRTIKMWDLLPLGPDTMTEDALKCKSLTTHK
AHDKDINSLDVAPNDRFLASGSQDKTAKVFEIDYVVTGTGSVRGEIRLVGTCKGHKRGVW
TVRFGRAERVLATGSGDKTVRLWSLEDFSCVKTFEGHTNSVLRVDFLNAGMQMVSAASDG
LVKIWNVREEECTVTLDNHEDKVWALAVSRDERTIVSGAADSVVTFWEDSTEEEEEEKEK
KRADMVLKEQDFLNYVSLHDYRNAISLALAMEQPGRLLNLFKQLRSNREDDSDMVPPTDC
ITGHPTVDEVIRTMHGSELTKLLKYVRDWNTHAKTSAVAQGVLFAVVKLRSAEDIMGAFT
AGGVGDLLSDKAGAGSTALKELIDALIPYTERHLARMERLVQESYVVDYLLSEMDDGMFD
EVGAEEESDGMDVDDGEWEGIAA
NT seq 2772 nt   +upstreamnt  +downstreamnt
atggcggtccccgtacgcccaaagctcaaaaccgcctttaagaaggctcgtgtcgttgcc
cctctatataccgggggacccgtagcagtggccggtgatggaagcaaactgttcagctgt
gttgctgaagatgtggtcatgacggatattgcctctggcacggagatgtgtcggtttgct
ggcgatacggaatctgtcaccgcacttgcagtatctccttcgtcaaaccatctcataatg
ttcacttcctccctatcgctccgggtgtacgaagttcccgaggctacagcagatacatcg
aagccaatacgacctgtgcgtgtagtgtctcgggcacacgacgctcccgtccatgtgtgc
aaggtggatccgacgtctagttacgtcgcatctggctctgcggatggcgtggtcaaagtt
tgggacgttcgtcgggggtacacgacccatatattcaaaggccatggcggggtggtcagc
gccttgacattcagttaccctcgggatccttctgccgtgaccttacccaagatgcacttg
attaccgcgtcggtcgacacgcggatccgcatcttcgatctctcggcctcggtttctcgc
aacggaagcttcaaggcagagcatatcctcgaaggccacgtttccgttcctcgtgggctc
gacgtcacagctgatgggaaatggctcgtcagtggcggacgggactcggtggtccttctt
tgggacttgtcgtctcttgctgggaattccaacaagccaaaatccagtaaggcgaagggc
aaagagaaggcgatggtccctgccttgatgaaaaccatccccgctctcgagcgggttgag
gctgtcgggctgttagccccctcagaagagctagggggaacgtcgaccggcactgataag
atacgcttttacaccggcggagagaagggtgtcatcaaaatatgggacggccagagcgga
tccgtaatgcacacgtttggctctgagtctgaactcgccagcgacgaggaacaagaagag
cagcgtcagatcgtcaacgccatctacgtgccggcaacgtccactatagtatcaatacac
gccgaccagaacatcctgttccattctctgtcgacgaaggctttgactaggcagctgatc
ggttataacgacgagatcgtagacgcgacgttcctcagtgccagcgcgaatgacccatcc
ggcgttgactcgcacatcgcgttggcaacaaactcttccctcattcgcgtctactcgacc
tcacaatcggacgcccgcttactcgagggtcacagcgatatcgttctctcactggaccac
agcgctcgtggagacgttttagccagcggcagcaaagacaggaccgcccgactatggagg
cctgcacaatataacagagagaaagctggggagtggggctggcgctgtgtcgcaatctgc
gaaggccacgccgagagcgtcggagcagtagcgttgccgcgtaaaagcgacgaggaacgg
cctcgcttcctgttcactggcagccaagaccgcaccatcaaaatgtgggacttgctgcct
cttggcccagacaccatgacggaggatgccctcaagtgcaaaagtcttacaacacacaaa
gcgcacgacaaggacatcaactccctcgatgtagccccgaacgatcgcttccttgcgtct
ggatctcaggacaagacggcgaaagtatttgagattgactatgtcgtcaccggcacaggg
tcggttcgcggcgagatcaggctcgtcgggacatgcaaaggacacaaacgaggggtgtgg
accgtacggttcggcagagcggagcgggtgttggccaccggaagcggagataagacggtc
cgattgtggagcctcgaagatttctcatgcgtgaagacgttcgaggggcacaccaattcc
gtgctgagggtcgactttttgaacgccggcatgcagatggtcagtgcggcgagcgatggg
ttggtgaagatatggaacgtgcgtgaggaggaatgcacagtaacactcgacaatcacgag
gacaaggtgtgggcacttgctgtcagcagggatgaacggaccatcgtatctggcgcggcc
gactcagtggtgacgttctgggaggattctaccgaggaagaagaagaagagaaggagaag
aagcgggcggatatggttttgaaagagcaagacttcctcaattacgtctcgctccacgac
tatcgaaatgcaatttcgctcgctttggcaatggagcagcccggtcgcctcctgaacctt
ttcaagcagctgcgctccaacagggaagatgattcggacatggtgcctcccacggattgc
atcacaggccatcctaccgtcgacgaggtcatccgcacgatgcacggctctgagctgacg
aagctcctgaagtacgtccgtgactggaacacgcatgcgaagacaagcgccgtggcgcag
ggcgtgttgttcgccgtggtcaagctccggagcgcggaggacattatgggggcctttacc
gccggcggcgtgggtgatttgctgagcgataaggccggcgcggggagcacggccctgaag
gagctgattgacgccctgatcccttacacggaacgtcatctggcgcgcatggaacggttg
gtgcaggaaagctatgtcgtggactatctgctgagcgagatggacgacgggatgttcgat
gaggtcggcgcggaggaagagagcgacggaatggacgtcgacgacggcgaatgggagggc
atcgccgcatag

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