Punctularia strigosozonata: PUNSTDRAFT_140355
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Entry
PUNSTDRAFT_140355 CDS
T03131
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
psq
Punctularia strigosozonata
Pathway
psq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PUNSTDRAFT_140355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_140355
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PUNSTDRAFT_140355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
18880542
NCBI-ProteinID:
XP_007378847
JGI:
140355
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MSAPRPKARPPLIPERYIDVPSQRLYVLSLGLLCQAIKIFDLAQYILGYDQTGYLQKWLW
VDFAYCVSLAQLRIPRLNYSKSVVVLQILSLWLLDGLMFGGIRVNGGADTADELSHRTLA
STPSSFGLSDVLSSIPGLGMLVSPGEGDKHLLGQHTVRMSPISTAQLHLEGQTFCLATPG
DSVLIPVLFNNSEPTSVRYSLSPLGSSVQSGKTKGTFSKPKTDVTELSAKELKAIESARA
EALQLTRSVTREVDDDEYDDDDETESTEGDLRSSYSWLQTSQSIFHIRVNKPGTLRLERV
AHASGVDARLAYPSEVKIAPCPSAEFVEDNTRIDDTIRCAGEDPDFDIKIRIYGVPPLSL
GWFRETNGQRESFVVQGIEGTHEESTESLDMAPQTIEVPLTVSVVTLGTHLYSLESVTDG
LGNHVTLRQPPAITNSRYTKQMTVLRRPSVSFRKCAPGKPAYLLIGSEASLPITAHDVDD
VDAPLSVKIRFEPSEGAGKVVKPWTKTILSQDMPRDFHLAVKDAGTYTIEEVHGRYCEGD
VLNPDVCPVVELPKPVAEIEWRRIHECSGDTGVAASLVLHGTPPFQVYYRAQRDRETARE
LVKTFQSARGELTLQPEHSGHYTYSFIALSDANYKRVTLNGPSIDQTVHPLASVDFSQPT
SGGRKRQISSCSGHLVNVDVELKGTGPWTVEYQIVSATRTDTITATGIQTSKASLEVPIP
ASVDTEGGFFNIDLVSVEDSSGCKRTVSVPGITVNVRRVQPTVKFYGRDDKRHLTVLERD
LARLPLRLTGDGPWRVEYRLQGEPERIRTATVSGPNDYLQVTEPGTYELLNVRDSQCPGT
VHANDATYAVDWVPRPFAALAKGTEATYEAYNGSYILPPVCEHTPDHIDLDLTGRPPFEI
TYNIARPSDMGGSVLIGQPTFSSIQPSTRFQLLTSDAGRIYYEVKQIGDAAYPLEKHKDT
TIPRASRLLFEQEVLRRPSARFETTNRMSHCLGDALVPSDAASEGVIVLEGTPPFIMNLS
VHNLAASEISKHTIKIRSKIWKVEIPDYHFNTIGPHRITIDSVQDASHCEQVVLDPSSQS
AMVDIVESAAIVPFDRKEHYCVGEVSQFQLEGIPPWTIGYRINGKSHSQNAIVSPFSLVQ
QQPGEFVVTSIAHQQQMCKTSVADLRYTVHPLPSAQVGHGKRILQDIHEGDQAEIVFTLL
GEPPFTFTYQRAETVNVKKAGRPGKVLETHTVSGVNTHEYSIFSASEGTWTVTFIADRYC
RYPFQDSVIRA
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccccgccccaaggcacggccgccgctcatccccgagcgctacatcgacgtg
ccctcccagcgcctctacgttctcagtctgggcttgctctgccaagcaatcaagatattc
gacttggctcagtatatccttggatatgaccagaccggctacctccagaaatggctctgg
gtcgacttcgcctactgcgtctccttggcacagctacgcataccaagactaaactattca
aaatcggtcgtcgtcctccaaatcttgtctctgtggcttctcgacggcctgatgtttggt
ggcatccgtgtcaatggaggcgccgacacagcagacgagctttcacatcgaacgctcgct
tcgaccccgtcttcgttcgggctttctgacgtcttgtcctcgatccctggtctgggcatg
ctcgtttctcctggggagggcgacaaacacctcctcggtcaacacactgtccggatgtca
cccataagcactgcacagctgcatctcgagggccagacgttttgtttagcgacgcctggt
gattcggttttgatccctgtcttgttcaacaactccgaaccgacctccgtgcggtattct
ctctcaccgcttggctctagtgtccagtctgggaaaacgaaaggcaccttttccaagcca
aaaaccgacgtcacggagctctcagcaaaggaactcaaggcgattgagagcgcacgcgcc
gaagcattgcagctcactcgttcagtaacacgagaggttgacgacgacgagtatgacgac
gacgacgaaactgaatcaacggagggcgatttaaggtcttcatactcctggctgcaaacg
tcacaatccatcttccacatccgcgtgaacaagccgggaacactgcgtctcgagcgcgtc
gcacacgcttcgggagtggatgcacgactggcgtatccctccgaagtgaagatcgcgcct
tgcccgtcagccgagtttgtcgaagacaacacccgcattgacgacaccattcgctgtgca
ggagaggacccggatttcgacataaaaatccgcatatacggcgtgcctcctctaagcctg
ggctggtttcgtgagacgaatggccagagggagtcatttgtggttcagggcatcgagggc
acccacgaggagtcgactgagtccctggatatggcacctcagaccatcgaagtccccttg
acagtgtctgtggtaacacttggcacgcacctttatagcctcgaatccgtcaccgatggt
ctggggaaccatgtgacgctcaggcagccaccagcgatcaccaactcgcgatatacgaaa
cagatgaccgtcctccggcgaccgagcgtctcattcaggaaatgtgcgcctggaaaacct
gcatatctgctgataggctcggaggcatcgctcccgattacagctcacgatgttgacgac
gtcgatgcccccctcagcgtgaagatcagatttgaaccttccgagggcgcaggcaaggtt
gtaaagccctggacgaagaccattctatcccaggatatgccgagagatttccatcttgcc
gtcaaggacgcgggaacatacacgatcgaagaggtgcatggtcgctattgtgagggcgat
gtcctgaatccggatgtctgtccggttgtcgaattgccaaagccagtcgcagagattgaa
tggaggcggatacatgaatgttctggcgacactggtgtggccgcctcccttgttcttcat
ggcactccgcctttccaagtatactatcgtgcacagagggatcgtgaaacagcacgcgag
ctcgttaagacattccaaagcgccaggggcgaactaaccttgcaaccggagcatagtgga
cattatacctactcgttcattgccctcagtgatgccaactacaagagagtgacccttaat
ggccccagcatcgaccaaacggtgcatccccttgcctccgtggatttctctcaaccgacc
tccggcggaaggaagaggcagattagtagctgttcaggtcatttggtcaatgtagatgtg
gaactcaagggaaccggaccatggacagtcgaatatcagattgtcagtgctacacggacc
gatactatcacagctaccggcatccaaacatcaaaagcttctctcgaagttccaattccc
gcatctgtggatacggagggaggttttttcaacatagacttggtcagcgttgaagactct
tccggttgcaagcgtactgtatcagtaccaggcattacggtcaacgtgcgccgagtccaa
ccaacagtcaagttctacggtagagacgacaagcggcatctcacggtcctggagcgcgat
ctcgcccgtttgcccctcagactcacgggtgacgggccttggcgtgtcgaataccggctg
cagggagaaccggaacgcattcgaacagcgactgtctcggggcctaatgattatctgcag
gtcactgaacctggcacttatgagcttttaaatgtccgagactcgcaatgccctgggacc
gtacatgcaaatgacgcgacgtacgctgttgactgggtaccgcgaccttttgcggcattg
gccaaagggactgaggcgacgtacgaagcgtataacggctcatatatcttgcctcccgtt
tgcgagcatacgcctgatcacattgatttggacctgactggccgaccaccgttcgagatt
acatacaacattgcccgtccaagcgacatgggaggcagcgtccttattggccaacccacg
ttcagcagtatccaaccgagcacgcgatttcaattactaacatcggacgctggccgcatt
tactacgaggtgaaacaaatcggagatgccgcatatcctctagagaagcacaaagacacg
actataccccgagcatccagactgctctttgagcaggaagttctccgtcgaccctcggct
cgtttcgagaccacgaatcggatgtctcactgcttgggcgatgctttggttccttcggat
gcggccagcgaaggcgtcattgtcctggaaggaactcctcctttcataatgaacctctcc
gtgcataatttggcggcaagcgagatttcaaaacataccatcaagattcgcagcaagatt
tggaaggttgaaattcccgattaccacttcaacaccatcggaccccataggatcaccatt
gacagcgttcaggatgcgtctcattgcgagcaggtggtgctggacccttcatctcagtca
gccatggtcgatatcgttgaatcagccgccattgtgccattcgaccgcaaagagcactat
tgtgtcggtgaggtgtcccagttccaattggagggcatcccgccgtggactatcggttat
cgaatcaatggcaaatcgcacagccaaaatgcgattgtgtcgcctttctcactggtacaa
caacagccgggggagtttgtggtaacatccatcgcacatcagcagcagatgtgcaaaacc
tctgtggccgatctacgctacaccgtacatcccttgccatccgctcaggttggacatggc
aagcgaatcttgcaagatattcacgaaggcgatcaagcggagatcgtctttacactactg
ggcgaaccgccgtttaccttcacgtaccaacgggcggaaaccgtcaacgtgaagaaggct
gggcggcccggcaaggtactcgaaacacacacagtatctggcgtcaatacacacgagtac
tcgatcttctccgcttccgaaggaacgtggaccgttaccttcatagcggatcgctactgc
cgttatccatttcaggattcagtgatcagagcttga
DBGET
integrated database retrieval system
