Punctularia strigosozonata: PUNSTDRAFT_140408
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Entry
PUNSTDRAFT_140408 CDS
T03131
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10755
replication factor C subunit 2/4
Organism
psq
Punctularia strigosozonata
Pathway
psq03030
DNA replication
psq03410
Base excision repair
psq03420
Nucleotide excision repair
psq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PUNSTDRAFT_140408
03410 Base excision repair
PUNSTDRAFT_140408
03420 Nucleotide excision repair
PUNSTDRAFT_140408
03430 Mismatch repair
PUNSTDRAFT_140408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psq03032
]
PUNSTDRAFT_140408
03036 Chromosome and associated proteins [BR:
psq03036
]
PUNSTDRAFT_140408
03400 DNA repair and recombination proteins [BR:
psq03400
]
PUNSTDRAFT_140408
DNA replication proteins [BR:
psq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PUNSTDRAFT_140408
DNA Replication Termination Factors
ELG1-RFC complex
PUNSTDRAFT_140408
Chromosome and associated proteins [BR:
psq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PUNSTDRAFT_140408
DNA repair and recombination proteins [BR:
psq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PUNSTDRAFT_140408
Check point factors
HRAD17(Rad24)-RFC complex
PUNSTDRAFT_140408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
nSTAND3
Viral_helicase1
AAA_3
RuvB_N
Rad17
Mg_chelatase
MeaB
NTPase_1
AAA_assoc_2
AAA_19
ABC_tran
RNA_helicase
Gp44_lid
AAA_18
SRP54
KTI12
AAA_11
AAA_24
ATPase_2
AAA_28
MCM
NB-ARC
AAA_30
Motif
Other DBs
NCBI-GeneID:
18880552
NCBI-ProteinID:
XP_007378926
JGI:
140408
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MTSTLGKGKGPATNGTVAYELPWVEKYRPKVLDDVVGNIETIERLKVIARDGNCPHIIIS
GMPGIGKTTSIHCLAHQLLGNAYKEGVLELNASDERGIEVVRNKIKTFAQKKVTLPPGRH
KIVILDEADSMTAGAQQALRRTMEIYANTTRFCLACNMSNKIIEPIQSRCAILRYSKLRD
TELLKRLLEICELEKVKYNDDGLTALIFTSEGDMRQAINNLQSTWSGFGFVSGDNVFKVC
DQPHPITVQTIIRACQKSDLDTAMEKLNDLWEQGYSAVDIVVTIFRVVKTMDDLPEYTEL
EYIKEIGFTHMRILEGVGTIIQLGGLIARLSKMNMRPQLFQT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgacctctactcttggcaaaggaaaaggacccgcaacgaacggcactgtggcatacgaa
cttccctgggtcgagaagtatcgacctaaggttttggacgacgtcgtcggcaacatcgag
actatagagcggttgaaagttatagcacgggatggaaactgccctcatatcatcatctct
ggcatgcctggcataggcaaaacaaccagcatacactgtctggcacatcaactgctgggg
aatgcttacaaggaaggggtgttggagctcaatgcgtcggatgaaagaggcatcgaggtt
gtgcggaataagatcaagactttcgcccagaagaaagtaacattaccccctggtcgacac
aagatcgtgatacttgacgaggcagacagcatgaccgctggtgctcagcaggcgctacga
cgtacaatggagatatacgcgaacacaacacgcttctgcttggcatgtaacatgtcgaac
aagatcatcgaacctattcagagtcgttgcgcgattctcaggtattcaaagctgcgagac
acggaactactcaaacgtctactcgaaatctgcgaactagagaaggtcaaatataacgat
gacggtctcaccgcactcatattcacctccgaaggggacatgcggcaagcaatcaacaac
ctacaatcgacttggtcgggatttggatttgtgtctggcgacaatgtgttcaaggtctgc
gaccagcctcacccgatcaccgtacaaaccatcatccgggcatgccaaaagagtgacctt
gacacggccatggaaaagctgaacgatctatgggagcaggggtacagtgctgtggatatt
gtcgtgactattttcagggtggtgaagaccatggacgatcttccggaatatactgagctg
gagtatattaaggaaatcggcttcacgcatatgcgcattctcgaaggggtgggaacaatt
atccagcttggtggattgatagctcgtctgagcaaaatgaacatgaggccgcaactattt
caaacctaa
DBGET
integrated database retrieval system
