Punctularia strigosozonata: PUNSTDRAFT_140673
Help
Entry
PUNSTDRAFT_140673 CDS
T03131
Name
(RefSeq) Fip1-domain-containing protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
psq
Punctularia strigosozonata
Pathway
psq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PUNSTDRAFT_140673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psq03019
]
PUNSTDRAFT_140673
Messenger RNA biogenesis [BR:
psq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PUNSTDRAFT_140673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Yae1_N
Motif
Other DBs
NCBI-GeneID:
18880596
NCBI-ProteinID:
XP_007379283
JGI:
140673
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MHYFGQRKQSPRREISVDKLPSPGSNGLVAQLEAKAEEETTAPEVSENGDEDEESDEDDI
EIITEPRPLSIDFRQNRPATVRQGSTGHVSTPTKPQGPSLTTEYTPRERGAVAPKTSTPQ
PSPSKPAAPGLAAGAQTVDIAPSAEDSKPENEGPDPSTLPPVTAPASHPKIDPTATGTID
GRSVYEVDLSNLADKPWRRPGSDISDWFNYGFDEISWEAYCFRRRELGDLATVLKTNVIN
FAGMPEEQLIALPPEIRQMVMASANTLMSGGGNPGMIPMMDMSQMQQMGMMGMNGMDGNM
MGQGGPGMPMGQAGMMQDGSGPNDGSMMNMQDGFGPGGGANMMNMGMGDGYAMQDPAVMQ
QGMQQGMQQGMQQGMNQGMNQGMNQGMYTGMEGSPAPIPTPIPGGRGAPFRARGQNLGSM
RGNRGGYMGRGRGGPPLPARSTSPLPPNVPTGPRNQNKYKDRDNNGPAVEGLDYGGGKDL
GDRDDDRTGGRKRRGSPDYGDDSRGSKRR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcactatttcggacaacgtaaacagagcccacgccgtgaaatatcggtggacaaactt
ccttccccaggttccaatggccttgttgctcagctggaggcgaaagcagaagaagagaca
acggcgccagaagtcagcgagaatggcgatgaagacgaggagagtgacgaagacgacatt
gagatcataacagaacctcgtcccctatcaatcgactttcggcaaaaccgtccagctacg
gtccgccagggcagtacaggacacgtttccactccgacgaaaccgcaagggccgtcgctc
accactgaatacacacctcgagaacgaggcgcggttgcccccaaaacctctacccctcaa
ccctctccatccaagcctgccgccccggggcttgctgccggggcgcaaacggtggatata
gcgccaagtgcggaagattcgaaacctgagaacgagggtcctgacccgtccacactccca
cccgtcactgcgccggcttcgcatccaaagatagaccctaccgcaacgggtactattgat
gggcgatcggtgtacgaggtcgatcttagcaaccttgccgacaaaccatggagaagacca
ggctcggatatctcggactggttcaactatggttttgacgagatttcgtgggaggcgtac
tgcttcagacgacgggagctgggagatcttgcaacagtcctcaaaacgaacgtcatcaac
tttgccggcatgcccgaagaacagctcatcgcgcttccacctgaaatccgacaaatggtg
atggccagcgcgaacaccctcatgtccggtgggggcaatcctggtatgattcctatgatg
gacatgtcgcagatgcaacaaatgggcatgatgggcatgaatggcatggatggtaatatg
atgggacagggcggcccaggtatgcctatgggccaggcaggcatgatgcaggatggctct
ggcccgaatgacggaagcatgatgaatatgcaggacggcttcgggccagggggcggagcg
aatatgatgaacatgggcatgggggatggctatgcgatgcaggatcctgccgtcatgcaa
cagggtatgcaacagggtatgcaacagggtatgcaacagggtatgaatcaaggcatgaac
cagggcatgaaccaagggatgtatactggcatggaaggcagtccagcacctataccgaca
cctattccggggggccgtggagcgcccttccgagcacgcggccaaaatctgggcagcatg
cgtggcaaccgcggtggatacatgggacgtggacgaggcggtcccccacttcctgcgcga
tctacttcaccattgcctcccaatgtgcccacaggacctcgaaatcaaaataaatataag
gaccgggataacaatggtcctgctgtagagggactggactacggtggtggaaaggatttg
ggcgacagagacgacgaccggacgggtggcaggaagcgacgagggtcgcctgattatggc
gatgattcgcgaggctcgaagcgtcgctga
DBGET
integrated database retrieval system
