Punctularia strigosozonata: PUNSTDRAFT_140684 Help Entry PUNSTDRAFT_140684 CDS       T03131                                  Name (RefSeq) antiviral helicase   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism psq  Punctularia strigosozonata Pathway psq03018   RNA degradation Brite KEGG Orthology (KO) [BR:psq00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PUNSTDRAFT_140684  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:psq03019]     PUNSTDRAFT_140684 Enzymes [BR:psq01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      PUNSTDRAFT_140684 Messenger RNA biogenesis [BR:psq03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      PUNSTDRAFT_140684   mRNA degradation factors    3'-5' decay     Ski complex      PUNSTDRAFT_140684 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel MTR4-like_stalk Helicase_C ResIII DEXQc_Suv3 Motif Other DBs NCBI-GeneID:  18880600 NCBI-ProteinID:  XP_007379297 JGI:  140684 LinkDB All DBs Position Unknown AA seq 1256 aa AA seqDB search MANEELIEQILHPDPQYADRLLSDLGFAGVPSREHVHREIEDKLLLPKPRLPDHWLSTYQ VHWQHTTSIPDLLTLEPSAPPTSLSFVRTGLDGRVTGYVETPNSRLATGTTSTSLDRAPA PSTNFVRGKSGYVPFWPGGFDDVLKDSSQPSAGNLRGVRAVPPGLSRGLRLPGEEVEDDE TMSIVEEAERQGHRATVSGDLLMNGHVPTIDRNDLTTQGTSEIDDLLPTTVTPLVPPAAL RQGRRANVRKRDWAHEVDINKPMHNFRDLVPEMAHQYPFELDTFQKQAVYHLEMGDSVFV AAHTSAGKTVVAEYAIALAQKHMTRHFQPLDLLQSAILIVQYRAIYTSPIKALSNQKFRD FKQTFSSQSVGILTGDVQINPEGNCLVMTTEILRSMLYKGADLIRDVEFVIFDEVHYVND AERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKRKDIYVISTAQRPVPLEHY LYSGREMHKVLDAKRNFLAQGYKDAAEALRRKQDKEREAAGLGPVQRTGGRGAPSRGGQR GGANAQRGAPARGRGTAPSRGGPPSRTFHQADKSLYVHLLGHLKKKGLLPVVVFTFSKKR CEENAATLTNADLCTAVEKSEVHIAIEKALSRLKGSDRKLPQIARMRDLLSRGIGVHHGG LLPIVKEVVELLFARGLVKILFATETFAMGVNMPARCVVFSGIRKHDGRSFREILPGEYT QMAGRAGRRGLDATGTVIVNANDDLPEQGILHHMMLGQPSKLQSQFRLTYNMILNLLRVE ALKVEEMIKRSFSENASQRLLPDQQRKVIEGERYLATLPKLECDICSADIELYYDSSREI VYLNQQLLSLASHHPQGIRTLAAGRVVVLRDGHFRCNVGVLLKPAPPQATELGTINQTKM YFVLALVNPETKRRENDIDSQMVAPRWDFQPESLLVQDGQYELSVIPVTSIAMVTDRILK VDADAIATIHKIAPMRDAAVSLASVVEEWITGGCIPEAEWVKMRSLEFQELLRSRDVIAQ RLSGRACTLCADFEKHYSIMHSEKILRASIAELKLAISDQNLELIPDYEQRIAVLQELKF IDEQSTVLLKGRVACEINSANELVLTELILENALASYEPEEIAALLSCFVFQEKTDNEPS VSPKLEEGRDTILAIEARVGRVQDAHKVAAEEFRALKFGLMEVVYEWAKGMPFEQITALT DVAEGTIVRCITRLDETCREVRDAARIIGDADLMKKMEDAQTKIKRDIVFAASLYF NT seq 3771 nt NT seq  +upstreamnt  +downstreamnt atggcaaacgaggagctcatcgaacaaatcctacatcctgatcctcagtatgccgatcgt ctactttctgatctaggcttcgctggcgtgccgtcgcgcgagcatgtccatcgagaaatt gaagacaagctactgctacccaaacctcggcttcctgaccactggctctcgacataccaa gttcattggcaacatacgacatcgattcccgatctcttgacccttgagccgtctgcacct cctaccagcttgtcttttgtccggacaggcctcgatggccgtgttacaggatatgtcgaa acgcccaactcccgattagccacaggtactacgtcgacctccttggaccgcgctccggcg ccttctacaaacttcgtgcgcgggaagtcgggatacgtgcctttctggcctggcggtttc gatgatgtgctgaaagactctagtcagccatcggctggcaatctgaggggcgtcagggca gtgccaccagggttgtccagaggcttgcgtctgcctggggaggaagtggaggatgatgag acaatgtcgatcgtcgaagaggctgagcggcaagggcaccgagcgactgtttccggagat ctcctgatgaacgggcatgtgccgacaatagatagaaatgaccttaccacccaaggaacc tcagaaatagatgacctgctgcccacaactgtcacgcctctcgttccgcctgccgccctc cgtcaaggacgacgtgcgaacgtgcgaaaaagagactgggctcatgaagttgacatcaat aaaccgatgcataatttccgcgatctcgtccctgaaatggcgcatcagtatcctttcgaa ttggacacctttcagaagcaagccgtgtatcatctggaaatgggggactcggttttcgtt gctgcgcatacgtctgcgggcaagacagtggtggcggagtacgcgattgctcttgcgcag aagcatatgaccaggcactttcagccccttgatctgcttcagagtgccattctcatcgtt caatacagggccatatacacctctcctatcaaggcgctgtcaaatcagaagtttcgagat tttaaacagactttctcctcacaatctgttggaatcctcaccggcgatgttcagatcaac cccgagggaaattgtcttgtcatgaccacagaaatcttacgcagtatgctctacaagggc gcggacctcatccgtgacgtagaattcgtcatatttgatgaagtacactatgtgaacgat gcggaacggggcgtggtctgggaagaagtgattatcatgttgccagaccatgtcaacata atcctcctttctgcaacagttccaaacacgaaggagtttgcggactgggtcgggcgaaca aaaaggaaagacatatacgttatatccactgctcagaggccggttcctctagaacattat ctctattcagggcgcgagatgcacaaggttcttgacgccaagcggaatttcttagcgcaa gggtacaaggacgcagccgaagctcttaggcggaaacaggacaaggaacgcgaagcggct ggattaggtccagttcaacggaccggaggccgcggggcgccatctcgtggcggacagcgt gggggggccaatgctcaacgaggtgcccctgccagaggtagaggaactgcgccaagtcga ggcgggccaccttctcggacctttcaccaggccgacaaaagcttatacgtgcaccttctt ggccacctgaagaagaaaggtctcctgcctgttgtcgtgttcactttctccaagaagaga tgcgaagagaacgcggcaacgctgaccaatgccgacctctgtacggcggttgagaagagt gaggtgcacatagccatcgaaaaagctttatcaagattgaaagggtccgatcgtaagctc cctcaaatagcgagaatgcgcgatcttctgtcgcgaggaattggcgtgcaccacggaggt ctcttgcctatcgttaaagaagttgtggaactccttttcgcccgaggactcgtcaagatc ttgtttgcgaccgagacgtttgccatgggtgtgaacatgcctgcccgatgtgttgtgttt tccggcatcagaaaacatgacggccgcagcttcagagagattttacctggtgaatatact caaatggcgggacgcgcggggagaagagggttggacgctacaggaaccgtcatcgtcaat gccaatgatgatttgccagagcaaggaattctgcatcacatgatgctgggacaaccatct aagctgcagtcgcagttccgcctaacctacaatatgatcttgaacttgcttcgggtcgaa gcactgaaagtggaagagatgatcaagcggagcttctcggagaatgcatcgcagcgactg ttaccagatcagcagaggaaggtcatcgagggcgagagatatctagcgacgcttccgaag ttggagtgcgacatttgttctgcggatatcgaactatactacgatagttcgcgggagatc gtctatctaaatcagcaactactctctcttgcaagccaccaccctcaagggatcagaaca ctggccgcaggtcgcgtggttgtccttcgcgacggccattttcggtgcaatgtgggtgtg ctattgaagccagcacctccacaagccaccgaactcggcaccatcaatcaaaccaagatg tacttcgtattggcccttgtgaacccagaaaccaaacgccgtgaaaatgacatagactcc cagatggttgcacctcgctgggacttccagccagaatcgctcttggtgcaggatggccaa tacgagctatcagtgatcccagtgacaagcatcgcaatggtgacggatcgtatcctgaag gtcgacgcggacgctattgcaacgatacataagatagctcccatgcgcgacgcggccgta agccttgcatccgtggttgaagaatggatcacgggtggctgcatcccagaagctgaatgg gtgaaaatgcggtccttggagtttcaggagcttctccgttcaagagatgtcattgcacag cgattatcaggacgcgcctgtacgttatgtgctgacttcgagaaacactactccatcatg cacagcgagaaaatcttacgtgccagcattgccgagctgaaattagccatctctgaccaa aatcttgaactcattcctgactacgagcagaggatcgctgttctacaggaactcaagttt attgacgaacagtccactgttctactcaagggacgtgtggcatgcgagatcaactctgcc aatgaactcgtgctcactgagcttatcctcgagaatgcattggcttcctacgaaccggaa gagatcgcggcattattatcctgcttcgtgttccaagaaaaaacggacaatgaaccatct gtttcgccgaaattggaggaggggcgtgatacgatcctcgccatcgaggcacgtgtaggg cgcgtacaagatgcgcacaaagtcgctgcggaagaatttcgcgcactcaagtttggtctg atggaagttgtctacgaatgggctaagggcatgccatttgagcagattaccgctcttacg gacgttgcggaaggaacgatcgtgcggtgtatcactcgcttggatgagacatgcagggaa gtgagagatgccgcgcgtatcattggcgacgcagatctgatgaaaaagatggaagatgcc cagacgaagataaagagggatatcgtatttgcggcaagcttgtatttctaa

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