Punctularia strigosozonata: PUNSTDRAFT_141374
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Entry
PUNSTDRAFT_141374 CDS
T03131
Name
(RefSeq) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
psq
Punctularia strigosozonata
Pathway
psq00100
Steroid biosynthesis
psq00909
Sesquiterpenoid and triterpenoid biosynthesis
psq01100
Metabolic pathways
psq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
PUNSTDRAFT_141374
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
PUNSTDRAFT_141374
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psq01006
]
PUNSTDRAFT_141374
Enzymes [BR:
psq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
PUNSTDRAFT_141374
Prenyltransferases [BR:
psq01006
]
Terpene biosynthesis
Squalene/phytoene synthase
PUNSTDRAFT_141374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
18880718
NCBI-ProteinID:
XP_007380333
JGI:
141374
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MGALDMLTMLVLHPVEFRTLIQYKLYHEKKRDITAQQEHPTSGWDRKSMRRCWEFLDMTS
RSFSAVIKELDGDLARTIALFYLVLRGLDTIEDDMTIPDEKKQPLLRTFHEKTVTPGWTF
DGNGPDEKDRQLLVEYDVVTEEMGLLDPNYREVIVDICHKMEDGMADFAHKAATTGRIYL
DTIEDYDLYCHYVAGLVGEGLSRLFSASGKEANWLQYQLEISNSMGLLLQKTNIIRDFRE
DIEEKRYFWPKEIWGREDYGGFTEMAQLAQPENERNALWAVSGMVVDALRHATDALDYLR
VLKNQSVFNFCAIPATMAMATLELVFMNPEMLQRNVKIRKAAAAKLIMASTNPRDVAYLF
RDSARKIHAKASPADPNFLRISVACGKIEQWCERQFPSFVRMQQSGTSGDVYQMLDPFDA
RTRIVELDKKREQQLAIEKRALAAGLDPQQIRQPQQTSTMEIAGLVAAMVGFILIISLGV
IWAVLKYFPDN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccctcgacatgctcacgatgctcgtcctacacccggtcgaattccggacgctc
atacagtacaagctgtaccacgaaaagaaacgagacatcacggcgcaacaggagcatccc
acctcaggctgggaccgcaagtctatgcggcgatgctgggaattcttggacatgacgagc
agaagtttttccgccgtcatcaaggagctcgacggtgatttggcgaggacgattgcactt
ttctaccttgttttgcgaggtttggacacgattgaagatgacatgacgatacccgacgag
aagaagcagcctttactgcgcactttccacgagaagactgtaaccccaggatggactttt
gacggcaatggccccgacgaaaaggaccggcaactgcttgtggaatacgatgttgtgaca
gaagaaatgggcttgttggatcccaactatcgcgaagttatcgtcgatatctgccacaaa
atggaagacggcatggcggattttgcgcataaagcagcaacgactggccgcatctacctc
gacaccatcgaggattacgatctctactgccactatgtcgctggcctcgtgggcgagggt
ctctcgcgcttgttctctgcttccggcaaggaggccaattggttacaataccagctcgag
atctcgaacagcatgggcctcctcctgcagaagaccaacatcatccgtgacttccgcgag
gacatcgaggagaagcgctacttctggccaaaggaaatctgggggcgcgaggattacggt
ggcttcaccgagatggcgcaactggcacagccggagaacgagcgtaatgccctctgggcg
gtcagcggcatggtcgttgacgcgttgcggcatgctacggacgcgctggattatcttcgt
gtgttgaagaaccagagtgtcttcaacttctgcgcaattccggcgacgatggccatggcc
acactcgaacttgtattcatgaacccggagatgctgcaacgaaatgtcaagatacggaaa
gcagcagcagctaagctcatcatggcgtcgacgaacccgcgagatgtcgcttaccttttc
cgagactctgcacggaaaattcacgcgaaggcttcgccggcagaccccaacttcctccgg
atatccgtcgcatgcggcaagatcgagcagtggtgtgaacggcaattcccgtccttcgtc
cgaatgcagcaatccggcacctcgggcgacgtttaccagatgctcgatcccttcgacgcg
cggacacgcatcgttgagctcgacaagaagcgggagcagcagctcgcgatcgagaagcgt
gcgctcgccgcgggtctcgacccgcaacagattcgccaaccacagcaaacgtcgacgatg
gagattgccggcctggtcgctgccatggttggcttcattctcatcatcagcttgggcgtc
atctgggctgtgctcaagtatttcccggacaactga
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